DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and cht-3

DIOPT Version :10

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_501082.2 Gene:cht-3 / 177464 WormBaseID:WBGene00016084 Length:1067 Species:Caenorhabditis elegans


Alignment Length:454 Identity:87/454 - (19%)
Similarity:165/454 - (36%) Gaps:116/454 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 HLDSRLCTHLVLGSGIGVDGDSGELRITDKILLLEKDKLSSV--KTMKWDS-----IKKVMFTIG 103
            :|.|..|:|:|:        ....|.::||  ::|:||...:  |...|.|     ..:::.::|
 Worm   391 NLKSDYCSHIVV--------PYFALDLSDK--MIEEDKAEDLVKKIDDWRSKIVEVAPRLILSVG 445

  Fly   104 GWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRWGFDGVQIDWRYPTLLGGHPDDRQNFVILLEEL 168
            . ::.|:.:..::.:...|......:::.:.....||::|.|....::...  |::|....:.: 
 Worm   446 S-KQASTIWQFLLGNDFHRKELAEGLVKAINSTNADGLEISWTSQPMVSDF--DKKNLKSFIND- 506

  Fly   169 GLIFRKNQLILMVAVLGRRDNRILESYNIPEIVNHSDFIHL---MMHDEQDPYHLRLAYNAPLVG 230
             ::......::.:.|...:.:...:.|:...:...:..|.|   .:|.:..|:   ..:.:||..
 Worm   507 -IVAADTAKMVEIVVATSQQSAYSDFYDYEHLNKTASLIVLHSHRLHSDSLPF---TGHPSPLRA 567

  Fly   231 YEGSVTDSIM-------HWKRNGGAPEKLILGIPLFVRSFTMDRNQSTVGSACKGPGRQTK---- 284
             ..|:|:..|       ||......|.||:|.:.....|.   ::.:.|.|:...|..|:.    
 Worm   568 -TSSMTNQKMSWESLLSHWVEKRVLPSKLVLSLSASTLSM---QSLADVRSSAATPFGQSAFVSM 628

  Fly   285 -QSHRPGFMTYNEWCVQQSKWSRMFDQL--AKVPYATRGDQWVSYENPRS-----IWAKMHLLQE 341
             :|.:....:..|.|......:.:...:  |:|||..|.||.|:|||.||     :||.|     
 Worm   629 LRSKKGDIHSQQEICESLKSGTGVTHWVDGAEVPYLRRYDQMVAYENTRSAHIKAVWASM----- 688

  Fly   342 HKLGGAMAWTIDVDDFRGRCGEQHGLLRVIFSALGDKNGLTTEKPTTEASGLCPHDGFSRDGWDC 406
            ..:||.....:..||....|..     |..|..|                     :..||     
 Worm   689 EGVGGLALHNMHQDDPSAVCDN-----RTAFPIL---------------------NALSR----- 722

  Fly   407 RLYHECRDGERIYYECLEGQYFDENQIVCRPAAEVKCDQ-------NFVIWRPGMPVYSYDNMP 463
                     .::...||:...|.            ||:|       ||.:.| ..||:..|.:|
 Worm   723 ---------AQVCQTCLKQHDFK------------KCEQHDFVVSCNFELKR-STPVFKTDIVP 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 71/357 (20%)
ChtBD2 394..438 CDD:214696 5/43 (12%)
cht-3NP_501082.2 Glyco_18 51..334 CDD:214753
Glyco_18 375..702 CDD:214753 66/337 (20%)
Glyco_hydro_18 760..1043 CDD:425828 2/5 (40%)
Blue background indicates that the domain is not in the aligned region.

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