DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and cht-2

DIOPT Version :9

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_495798.2 Gene:cht-2 / 174363 WormBaseID:WBGene00011757 Length:626 Species:Caenorhabditis elegans


Alignment Length:473 Identity:115/473 - (24%)
Similarity:189/473 - (39%) Gaps:113/473 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 THLVLG-------SGIGVDGDSGELRITDKILLLEKDKLSSVKTMKWDSIKKVMFTIGGWEEDSS 110
            ||||..       ..:.::||:.:.|:         :.:..|.:...|  .|:::.:||| |:|.
 Worm    55 THLVFAFFVVDSDGSVKLEGDAAKARL---------EHVKEVASRHPD--LKLLYAVGGW-ENSQ 107

  Fly   111 SFSRMVASPKKRDNFYSSMLEFMFRWGFDGVQIDWRYPTLLG---GHPDDRQNFVILLEELGLIF 172
            .||.:.|...:|....|:.::.:..:|||||.|||.||...|   |.|.||:|:|.|:.||    
 Worm   108 YFSVLTADHSRRSILISNFVKVIKEYGFDGVDIDWEYPVTGGAVEGTPADRRNYVNLMREL---- 168

  Fly   173 RKNQL---------ILMVAVLGRRDNRILE-SYNIPEIVNHSDFIHLMMHDEQDPYHLRL-AYN- 225
             :|:|         ..:::..|...:.:|: .|::.:::.:.||:::|.:|....:..:. ||. 
 Worm   169 -RNELRDLESETGKSYLISFAGAAGHWVLKPGYDLQQLMKYCDFVNVMSYDYFGAWASKWGAYTG 232

  Fly   226 --APL-----------VGYEGSVTDSIMHWKRNGGAPEKLILGIPLFVRSFTMDRNQSTVGSACK 277
              |||           :....::.|.....|    |.:|:.:|:|.:.|.:      ..||.|..
 Worm   233 PPAPLQFAMPKKFSGRMNVHATMKDYSCQIK----ATDKINMGVPFYGRFW------KNVGDAVD 287

  Fly   278 GPGRQTKQSHRPGFMTYNE----------WCVQQSKW---SRMFDQLAKVPYATRGDQ--WVSYE 327
                .|....|....|.:|          |.....|:   ...|...:|.|:....:|  :|.||
 Worm   288 ----STDDMWRTATATNSEGTKFEGGDVQWRDLHEKFDTTKTKFHSGSKTPFIWLSEQKTFVGYE 348

  Fly   328 NPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGR----------CGEQHGLLRVIFSALGDKNGLT 382
            |..|:..|:..:.|:.:||.|.|.||.||.:|.          |...........|.:.||...|
 Worm   349 NAESLKHKVDYIVENNIGGVMIWAIDFDDDQGTLLNSAAAESICTTSTKSFNYKCSPVDDKRWWT 413

  Fly   383 TEKPTTEASGLCPHDGFSRDGW------------DCRLYHECRDGERIYY--ECLEGQY-FDENQ 432
            .: ...|.:|:|.......||:            .|..|..|..|.....  ||::  | .|.|.
 Worm   414 YD-DNEELAGMCGKSSPLIDGYYPVCDPDDPGHACCGKYGYCGSGAEFCSCPECID--YGADPNL 475

  Fly   433 IVCRPAAEVKCDQNFVIW 450
            |:..|   ||..|. :.|
 Worm   476 ILKEP---VKPSQK-ITW 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 92/381 (24%)
Glyco_hydro_18 47..355 CDD:279094 87/351 (25%)
ChtBD2 394..438 CDD:214696 13/58 (22%)
cht-2NP_495798.2 Glyco_18 33..376 CDD:214753 87/351 (25%)
GH18_chitinase-like 35..376 CDD:299167 87/351 (25%)
ChtBD1_GH18_2 418..469 CDD:211315 11/52 (21%)
ChtBD1_GH18_2 496..547 CDD:211315
ChtBD1_GH18_2 567..618 CDD:211315
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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