DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Cht12 and btb-16

DIOPT Version :9

Sequence 1:	NP_726022.1	Gene:	Cht12 / 246535	FlyBaseID:	FBgn0050293	Length:	470	Species:	Drosophila melanogaster
Sequence 2:	NP_494499.2	Gene:	btb-16 / 173674	WormBaseID:	WBGene00018195	Length:	304	Species:	Caenorhabditis elegans

Alignment Length:	152	Identity:	30/152 - (19%)
Similarity:	55/152 - (36%)	Gaps:	43/152 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly    82 DKLSSVKTMKWDSIKKVMF----TIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRWGFDGVQ 142
            ||::....:|:...:...|    |:....|...:.:::|.:|.::     ..:|.|:.:..
Worm    70 DKIAGAIDVKFGQNQSQNFTTVRTLVSLTEPCQTLTKVVENPNRQ-----GAVEVMYEYAL---- 125

  Fly   143 IDWRYPTLLGGHPDDRQNFVILLEELGLIFRKNQLILMVAVLGRRD---NRILESYNIPEIVNHS 204
            :.|..|....            .:|:.|...||...|   |:|.|.   |:...||       ||
Worm   126 VPWITPLQFS------------FDEMFLPSEKNDAFL---VIGERKLHVNKAFLSY-------HS 168

  Fly   205 DFIHLMM-----HDEQDPYHLR 221
            |:...:.     .|:||...|:
Worm   169 DYFQALFSSNFKEDKQDEIELK 190

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Cht12	NP_726022.1	GH18_chitinase-like	25..375	CDD:299167	30/152 (20%)
		Glyco_hydro_18	47..355	CDD:279094	30/152 (20%)
		ChtBD2	394..438	CDD:214696
btb-16	NP_494499.2	BTB	147..243	CDD:197585	14/54 (26%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG3325
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900