DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and chil-24

DIOPT Version :10

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_494455.1 Gene:chil-24 / 173661 WormBaseID:WBGene00020407 Length:410 Species:Caenorhabditis elegans


Alignment Length:394 Identity:90/394 - (22%)
Similarity:165/394 - (41%) Gaps:95/394 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 CIAKEYNVFCQYDLGSYYYKGRSQ-----------FFEW-------HLDSRLCTHLVLG------ 58
            |..|:.:.|  :.:.|.|....::           :.:|       |..::| ||.|..      
 Worm    27 CHEKQDSTF--FSIHSNYKMSNNETETTPSRIVGFYADWERTDITSHQVAKL-THAVFAYVQMKF 88

  Fly    59 -SGIGVDGDSGELRITDKILLLEKDKLSSVKTMKWDSIKKVMFTIGGWEEDSSSFSRMVASPKKR 122
             ..:|...|:..:|.::.     :||:...:    ||..|:|.:|||: |:|..|..::::.:.:
 Worm    89 DGSLGFKNDAARIRFSNL-----RDKVRRNE----DSNVKMMISIGGF-ENSQHFYPVLSNVEMK 143

  Fly   123 DNFYSSMLEFMFRWGFDGVQIDWRYPTLLGGHPDDRQNFVILLEELGLIFRKN---QLILMVAVL 184
            ..|.:|:..|:......||.|.|::|:     |:|:.::...|.:|    |::   :.|:.|||.
 Worm   144 KAFLNSISSFLAYHELHGVDIFWKWPS-----PEDKAHYSRFLADL----RQHLGYEFIISVAVP 199

  Fly   185 GRRDNRILESYNIPEIVNHSDFIHLMMHDEQDPYHLRLAYN---------APLVG-YEGSVTDSI 239
            ....:.:...|::..|.:|.||.::...|...|:.     |         :||.| ...:|..::
 Worm   200 QAEVSNLELGYDLRTISSHVDFFNVHSMDYYGPWP-----NEWGKPTGPISPLYGPTRHNVDWTL 259

  Fly   240 MHWKRNGGAPEKLILGIPLFVRSFTMDRNQSTVGSACKGPGRQTKQ-----SHRPGFMTYNEWCV 299
            .::....|.|.||.:.||.|||.:      ..|....: ||||..:     .::|....|     
 Worm   260 RYYAEKTGEPGKLNMVIPFFVRLW------KNVPEPVE-PGRQVFRDVELVDNKPQGEAY----- 312

  Fly   300 QQSKWSRMFDQLAKVP----------YATRGD--QWVSYENPRSIWAKMHLLQEHKLGGAMAWTI 352
             .|:||...::|...|          |....|  .:|::|..:||..||..::|..|||...|.:
 Worm   313 -MSRWSAQHEELDLSPADWDEETRSSYTWNPDTRNFVTFETDKSIQEKMKYVKEKNLGGVWIWHV 376

  Fly   353 DVDD 356
            |.::
 Worm   377 DANE 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 88/387 (23%)
ChtBD2 394..438 CDD:214696
chil-24NP_494455.1 Glyco_18 55..378 CDD:214753 84/360 (23%)
Blue background indicates that the domain is not in the aligned region.

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