DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and CHIT1

DIOPT Version :9

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_003456.1 Gene:CHIT1 / 1118 HGNCID:1936 Length:466 Species:Homo sapiens


Alignment Length:467 Identity:134/467 - (28%)
Similarity:213/467 - (45%) Gaps:70/467 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FMIMIFLICGCIAKEYNVFCQYDLGSYYYKGRSQFFEWHLDSRLCTHLVLGSGIGVDGDSGELRI 72
            ||:::.:..|..||   :.|.:...:.|.:|.::|....||..|||||:.......:........
Human    10 FMVLLMIPWGSAAK---LVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQLSTTEW 71

  Fly    73 TDKILLLEKDKLSSVKTMKWDSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRWG 137
            .|:.|..|.:.|.     |.:...|.:..||||...:..|:.|||:...|..|.:|.:.|:.::.
Human    72 NDETLYQEFNGLK-----KMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYS 131

  Fly   138 FDGVQIDWRYPTLLGGHPDDRQNFVILLEELGLIFR-------KNQLILMVAVLGRRDNRILESY 195
            |||:.:||.||...|....|::.|..|:::|...|:       |.:|:|..||...: ..:...|
Human   132 FDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQ-TYVDAGY 195

  Fly   196 NIPEIVNHSDFIHLMMHDEQDPYHLRLAYNAPLV------GYEGS--VTDSIMHWKRNGGAPEKL 252
            .:.:|..:.||::||.:|....:.....:|:||.      |...|  |..::..|.:.|....||
Human   196 EVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKL 260

  Fly   253 ILGIPLFVRSFTMDRNQST-VGSACKG---PGRQTKQSHRPGFMTYNEWCVQQSKW-----SRMF 308
            |||:|.:.||||:..:..| ||:...|   ||..||:.   |.:.|.|.|    .|     .|:.
Human   261 ILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEG---GMLAYYEVC----SWKGATKQRIQ 318

  Fly   309 DQLAKVPYATRGDQWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRG-RCGE-QHGLLRVI 371
            ||  ||||..|.:|||.:::..|...|:..|::..|||||.|.:|:|||.| .|.: ::.|::.:
Human   319 DQ--KVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTL 381

  Fly   372 FSALG-------------DKNGLTTEKPTTEASGLCP-HDGFSR---DGWDCRLYHECRDGERIY 419
            ...|.             .|.|    :|:....|..| .|.|.:   ||    ||...|: ...:
Human   382 RQELSLPYLPSGTPELEVPKPG----QPSEPEHGPSPGQDTFCQGKADG----LYPNPRE-RSSF 437

  Fly   420 YECLEGQYFDEN 431
            |.|..|:.|.::
Human   438 YSCAAGRLFQQS 449

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 112/375 (30%)
Glyco_hydro_18 47..355 CDD:279094 102/331 (31%)
ChtBD2 394..438 CDD:214696 12/42 (29%)
CHIT1NP_003456.1 Glyco_18 23..363 CDD:214753 107/357 (30%)
GH18_chitolectin_chitotriosidase 24..385 CDD:119351 112/375 (30%)