DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and si:ch211-226m16.2

DIOPT Version :9

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001191302.1 Gene:si:ch211-226m16.2 / 100003708 ZFINID:ZDB-GENE-030131-2302 Length:410 Species:Danio rerio


Alignment Length:381 Identity:75/381 - (19%)
Similarity:145/381 - (38%) Gaps:86/381 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 HLDSRLCTHLVLGSGIGVDGDSGELRITDKILL--LEKDKLSSVKTMK-WDSIKKVMFTIGGWEE 107
            |.....|||::|.|   |..|       |::.|  |.:::..:::.|| .:|..|::.   |.|.
Zfish    35 HTREGSCTHIILPS---VSSD-------DELYLQSLTENEYDAIQRMKERNSALKILL---GLEI 86

  Fly   108 DSSSFSRMVASPKKRDNFYSSMLEFMFRWGFDGVQIDWRYPTLLGGHPDDRQNFVILLEELGLIF 172
            .||....|.|:.....:|..::|.::.....||:.:.|     |.|.|.|.:.|...|:.:..:|
Zfish    87 KSSRLKLMSANEASVGSFIQTLLTYLKEKRLDGLDVIW-----LDGTPSDTELFTDFLKSIKGVF 146

  Fly   173 RKN-QLILMVAVLGRRDNRILESYNIPEIVNHSDFIHLMMHDEQDPYHLRLAYNAPLVGYEGS-V 235
            .:. :.:|:.|.:....::.:.||:...:..:.|||.::      |..|:.         :|. :
Zfish   147 EEEMRPLLLSASVKEPTDKTVASYDEQILSQYVDFISIL------PAQLQT---------DGQYI 196

  Fly   236 TDSIMHWKRNGGAPEKLILGIPLFVRSFTMDRNQSTVGSACKGPGRQTKQSHRPGFMTYNEWCVQ 300
            :.:..||:......:||.|.:|.|::                   |...:.|......:::...:
Zfish   197 SKTAQHWQDKQVDLQKLGLVMPGFLQ-------------------RSRHRHHHRNHPKHDDTTAE 242

  Fly   301 QSKWSRMF-------DQLAKVPYATRGD-QWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDF 357
            :.|...:.       ||:.:.  ...|. |:::..:.....:.:..:.:...||.....||:|.|
Zfish   243 EGKKDHVHLLNLYLGDQVCQA--VKSGQLQFITLTSVSDEQSPIKEVLQQGFGGIGVVLIDLDVF 305

  Fly   358 -RGRCGEQHGLLRVIFSALGDKNGLTTEKPTTEASGLC-PHDGFSRDG-WDCRLYH 410
             ...|                .|....|:.|.|:..:. .|.|..|.| .|.|.:|
Zfish   306 GNSMC----------------PNMTQKERATVESKAIMHSHHGHRRHGHGDHRHHH 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 64/342 (19%)
Glyco_hydro_18 47..355 CDD:279094 60/320 (19%)
ChtBD2 394..438 CDD:214696 7/19 (37%)
si:ch211-226m16.2NP_001191302.1 GH18_chitinase-like 41..>185 CDD:324582 39/161 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.000

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