DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30291 and cdk5rap3

DIOPT Version :9

Sequence 1:NP_726016.1 Gene:CG30291 / 246534 FlyBaseID:FBgn0050291 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_031749928.1 Gene:cdk5rap3 / 496928 XenbaseID:XB-GENE-1005961 Length:525 Species:Xenopus tropicalis


Alignment Length:514 Identity:163/514 - (31%)
Similarity:270/514 - (52%) Gaps:52/514 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IPIDIHTLKLQDWLISRRIVPKNVQQELREIHRKISNALQDMPSNEQLIKLLARTNINYYHVKEI 70
            :||||.|.:|.|||:.||......|.::.:|..||:.||||||.::::..||:.|.|||:|..:|
 Frog     7 VPIDIQTSRLLDWLVDRRHCTLKWQSKVLQIREKINQALQDMPEHDEIRGLLSGTYINYFHCLKI 71

  Fly    71 IEILKQTEKDTKSVFGTYGSQRMKDWQEISRLYEKNATYLAETAQIFVRNVNYEIPGVRKQMARL 135
            :||||.||..|:::||.|.|||||||||:..||:.:.|||.|:|.:.:|:|:||||.:||||:|.
 Frog    72 VEILKGTEAATRNLFGRYSSQRMKDWQEVVSLYQADNTYLGESASLLMRSVSYEIPALRKQMSRC 136

  Fly   136 EQQADETQKRAHDLNKPESQILADHSALLEQLGVKGDNLHAEFVQVLSGLPELYDKSLVGIANIQ 200
            ||.|.|:::||.:.....::....:....:..|:.|:::..|.:.::..:|.:..:.....|.:.
 Frog   137 EQLALESERRAEECLHGAAEQREQYYNSCKNYGISGEDIQKELLALVCDVPSVLRQIGADSAGLL 201

  Fly   201 PGIDLYAEV------SGNKQVLPILNHLVEFGNTTVYQYIHKEAPLAVEEPPIRLNLSEGNASKD 259
            |.|.||...      |..::.||:|.|:.:.|:||:|::...:||..||.|           .|:
 Frog   202 PAIQLYQACVAFVCDSSPEEALPLLRHVQKSGDTTIYEWRVGKAPERVERP-----------GKE 255

  Fly   260 DNAVAEIDFGTDDNGGTSSTVSAEIIDYGDF---GSGDLPESDG----GNIDWGIESAPTDAVE- 316
            :..             |...:..|.|::|||   .|.......|    |:|||||...| :|.| 
 Frog   256 EQE-------------TPKCLEDEEINWGDFEVQPSATAETEAGLDSTGDIDWGISVEP-EAAEG 306

  Fly   317 --INFDI---PVEEYGIVVEGTGMDGGTAKGDQAYTLLDSPNYRDRFLDEIYELESFLRMRIYEL 376
              ||:||   |.....::..||.:..|.|:|..|.::|::.:.|::|:||:.|||.||   ....
 Frog   307 DGINWDIGEEPAAMITVLETGTDVPSGVARGVDALSVLENTDTRNQFVDELMELELFL---CQWQ 368

  Fly   377 KQLESSSDIM----FSLMDNI-ATHDGESIWKILVSVEKIIQQTSDKQTQHLFQLKHSPKYANML 436
            :.::..:||:    |....:| .....|.:..:|..|..:|.:.:|.:.:.||.:..||:|.:.:
 Frog   369 QSMDCDTDIVTVTQFQTAPSILQAQTQEKVLAMLSVVRGLINRLTDTRMRQLFLILASPRYVDRV 433

  Fly   437 ATKLQQMTKAVEKLRATREALKQLTIELREQRQDLNPVLEELIAQTRTLQSHIEKDISK 495
            ...|:|..:..:.|....|:..:.....:|:||.|.|.|..|..::|.|:..:.:..||
 Frog   434 TDHLRQRLRQAQLLERKSESWVERGRAAQEERQSLEPRLSLLQERSRELKKQVSRQYSK 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30291NP_726016.1 DUF773 3..506 CDD:283293 163/514 (32%)
cdk5rap3XP_031749928.1 DUF773 4..495 CDD:398951 163/514 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 257 1.000 Domainoid score I1992
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12718
Inparanoid 1 1.050 257 1.000 Inparanoid score I3071
OMA 1 1.010 - - QHG55506
OrthoDB 1 1.010 - - D397659at33208
OrthoFinder 1 1.000 - - FOG0006409
OrthoInspector 1 1.000 - - oto104925
Panther 1 1.100 - - LDO PTHR14894
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4673
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.080

Return to query results.
Submit another query.