DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppcdc and CAB3

DIOPT Version :10

Sequence 1:NP_726105.1 Gene:Ppcdc / 246533 FlyBaseID:FBgn0050290 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_012835.1 Gene:CAB3 / 853774 SGDID:S000001571 Length:571 Species:Saccharomyces cerevisiae


Alignment Length:199 Identity:77/199 - (38%)
Similarity:118/199 - (59%) Gaps:17/199 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NVMIAATGSVATIKLAQLIRELSDERLPFKFHLKVLITEAAKHFFELEQIPENVPIYHNRDEWI- 69
            :::|.|||||||||:..:|.:|.....|.|..:::::|:.|:||.:..::..:|.|:...|.|: 
Yeast   310 HILIGATGSVATIKVPLIIDKLFKIYGPEKISIQLIVTKPAEHFLKGLKMSTHVKIWREEDAWVF 374

  Fly    70 -TWNKRG-----DPVLHIDLGKWADLLVIAPLSANSLSKMATGICDNIVMCVVRAWDLEKPLLFA 128
             ..||..     :.:||.:|.||||:.:|||||||:|:|:|.|||:|::..|:|.|....|:|.|
Yeast   375 DAVNKNDTSLSLNLILHHELRKWADIFLIAPLSANTLAKLANGICNNLLTSVMRDWSPLTPVLIA 439

  Fly   129 PAMNTRMYDHPITREQIDKLTSWGYKEIPCI------SKTLMCGDTGNGAMAEVPTIVEAVLSAF 187
            |||||.||.:|:|::.:..|.    ::.|.|      .|.|:|||.|.|.|.|...|||.|....
Yeast   440 PAMNTFMYINPMTKKHLTSLV----QDYPFIQVLKPVEKVLICGDIGMGGMREWTDIVEIVRRRI 500

  Fly   188 QPIK 191
            ..|:
Yeast   501 NEIR 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpcdcNP_726105.1 Flavoprotein 7..187 CDD:450266 76/192 (40%)
CAB3NP_012835.1 Flavoprotein 264..497 CDD:450266 75/190 (39%)

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