DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppcdc and AT5G02080

DIOPT Version :10

Sequence 1:NP_726105.1 Gene:Ppcdc / 246533 FlyBaseID:FBgn0050290 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001331970.1 Gene:AT5G02080 / 831921 AraportID:AT5G02080 Length:317 Species:Arabidopsis thaliana


Alignment Length:415 Identity:86/415 - (20%)
Similarity:132/415 - (31%) Gaps:179/415 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RPLVAL-LDGRD-CSIEMP-------ILKDVATVAFCDAQSTSEIHEKVLNEAVGALMWHTIILT 78
            :|.|.| ::|:| .||:||       :||:..|:.....    :||:                :|
plant    70 QPYVHLYINGKDNYSIQMPQFANRTELLKENITIGIFPL----KIHK----------------VT 114

  Fly    79 KEDLEKFKALRIIVRIGSGVDNID----------VKAAGELGIAVCNVPGYGVEEVADTTMCLIL 133
            .:|..|:...         |::.|          |.|.|.|.:...|.  |...|.|....|   
plant   115 AQDSGKYYCF---------VESSDHHSMATVQLQVTAVGSLPVISSNT--YTSNEPAFCESC--- 165

  Fly   134 NLYRRTYWLANMVREGKKFTGPEQVRDAAQGCARIRGDTLGLVGLGRIGSAVALRAKVFGFNVSF 198
                  .||            ||.        :.|..||.|:       ..:..:.||:      
plant   166 ------GWL------------PEP--------SLIWTDTQGI-------RVIPSKEKVY------ 191

  Fly   199 YDPYLPDGIEKSLGLNRVYTLQELLFHSDCVSLHCT-LNEHNHHLINEFTIKQMRPGAFLVNTAR 262
                   ..||||     |.:..::...|..::.|| ||..|.   :::..|.:|.....| |.|
plant   192 -------RDEKSL-----YCIFSIISLPDSSNITCTVLNSVNQ---SKYHSKPIRETGLPV-TCR 240

  Fly   263 GGLVDDE------------ALAVAL--------KQGRIRAAALDVHENEPYNVFQGALKDAP-NL 306
                 |:            ||.|.:        :..|:||...:..:||.::      ::|| |.
plant   241 -----DQYSRYIVLWPCLVALIVCIGYIYHQSKELKRLRAELDNCKQNEHHS------EEAPVNG 294

  Fly   307 LC----TPHAAFYSEAATTELREMAASEIRRAIIGNIPECLRNCVNKEYFLRSSTGGGAGGYSEA 367
            :|    ||:....|:..|.               ||:|....|            |..|.||...
plant   295 ICAAGYTPNGCTSSDHGTH---------------GNVPSAPVN------------GICAAGYVPI 332

  Fly   368 GINGGYYSGGLQQAHSTTPLEAPHS 392
            |.....:  |.|..:|     |.||
plant   333 GSTSSDH--GTQGKNS-----ADHS 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpcdcNP_726105.1 Flavoprotein 7..187 CDD:450266 36/182 (20%)
AT5G02080NP_001331970.1 PRK05579 <38..268 CDD:235513 58/291 (20%)

Return to query results.
Submit another query.