DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30289 and l(2)k05911

DIOPT Version :10

Sequence 1:NP_726081.1 Gene:CG30289 / 246532 FlyBaseID:FBgn0050289 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster


Alignment Length:277 Identity:86/277 - (31%)
Similarity:121/277 - (43%) Gaps:56/277 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 CGISKDDPYVPN---IFGGAKTNIQENPWMVLVWSS--KPCGGSLIARQFVLTAAHCVS------ 83
            ||  ..:|..|:   |.||...:..|.||:.:::.|  :.||||||....:|||||||:      
  Fly   387 CG--NKNPVTPDQERIVGGINASPHEFPWIAVLFKSGKQFCGGSLITNSHILTAAHCVARMTSWD 449

  Fly    84 FEDLYVRLGDYETLDPMPYCLNNHCIPKFYNISVDMKIV-----------HENYNGITLQNDIAL 137
            ...|...|||                   |||..|.::.           |:.:...||.||:|:
  Fly   450 VAALTAHLGD-------------------YNIGTDFEVQHVSRRIKRLVRHKGFEFSTLHNDVAI 495

  Fly   138 LRMSEAVEYSDYVRPICLLVGEQMQSI----PMFTVTGWGE-TEYGQFSRILLNATLYNMDISYC 197
            |.:||.|.::..::||||......||.    .:.||.|||. .|.|....||....:.....:.|
  Fly   496 LTLSEPVPFTREIQPICLPTSPSQQSRSYSGQVATVAGWGSLRENGPQPSILQKVDIPIWTNAEC 560

  Fly   198 NIKFNKQAD----RSQICAGSHTSNTCKGDSGGPLSSKFHYGNRLLSFQYGLVSYGSERCAANVA 258
            ..|:.:.|.    .|.||||....::|.||||||:  ..:.|.|..  |.|:||:|.........
  Fly   561 ARKYGRAAPGGIIESMICAGQAAKDSCSGDSGGPM--VINDGGRYT--QVGIVSWGIGCGKGQYP 621

  Fly   259 GVYTNVSYHREWIFNKM 275
            ||||.|:....||:..:
  Fly   622 GVYTRVTSLLPWIYKNI 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30289NP_726081.1 Tryp_SPc 42..271 CDD:238113 80/256 (31%)
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628
Tryp_SPc 400..637 CDD:238113 82/259 (32%)
Blue background indicates that the domain is not in the aligned region.

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