DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30289 and Gzmf

DIOPT Version :10

Sequence 1:NP_726081.1 Gene:CG30289 / 246532 FlyBaseID:FBgn0050289 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_703196.2 Gene:Gzmf / 266704 RGDID:628603 Length:248 Species:Rattus norvegicus


Alignment Length:246 Identity:77/246 - (31%)
Similarity:104/246 - (42%) Gaps:33/246 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 IFGGAKTNIQENPWMVLV------WSSKPCGGSLIARQFVLTAAHCVSFEDLYVRLGDYETLDPM 100
            |.||.:......|:|..|      .:...|||.|:...||||||||.. ..:.|.||.:      
  Rat    21 IIGGHEVKPHSRPYMAHVKFVKVDGNRSVCGGFLVQDYFVLTAAHCTG-RSMKVILGAH------ 78

  Fly   101 PYCLNNHCIPKFYN-ISVDMKIVHENYNGITLQNDIALLRMSEAVEYSDYVRPICL-LVGEQMQS 163
                |.|...|... |.|...|.|..||.....|||.||::....:.:..|||:.| ...:.::.
  Rat    79 ----NLHVQEKTQQIIPVKRAIPHPAYNREDHINDIMLLKLESKAKKTRAVRPLNLPRPNDMVKP 139

  Fly   164 IPMFTVTGWGETEYGQFSRI--LLNATLYNMDISYCNIKFNKQADRSQICAG--SHTSNTCKGDS 224
            ..:..|.|||:.......|.  |..|.|...:...|...|:..::.::||||  .......||||
  Rat   140 GDVCRVAGWGQMSVDVTKRTSRLQEAKLIIQEDKECKKLFHHYSETTEICAGDPKKIQAAYKGDS 204

  Fly   225 GGPLSSKFHYGNRLLSFQYGLVSYGSERCAANVAGVYTNVSYHREWIFNKM 275
            ||||..:    ||    .||:||||.....:  :||:|.|.|...||...|
  Rat   205 GGPLVCE----NR----AYGVVSYGKNGTIS--SGVFTKVVYFLPWISRNM 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30289NP_726081.1 Tryp_SPc 42..271 CDD:238113 74/240 (31%)
GzmfNP_703196.2 Tryp_SPc 21..244 CDD:238113 76/243 (31%)

Return to query results.
Submit another query.