DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30289 and Gzmb

DIOPT Version :10

Sequence 1:NP_726081.1 Gene:CG30289 / 246532 FlyBaseID:FBgn0050289 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_612526.2 Gene:Gzmb / 171528 RGDID:620018 Length:248 Species:Rattus norvegicus


Alignment Length:255 Identity:74/255 - (29%)
Similarity:103/255 - (40%) Gaps:51/255 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 IFGGAKTNIQENPWMVLVW------SSKPCGGSLIARQFVLTAAHCVSFEDLYVRLGDYETLDPM 100
            |.||.:......|:|..:.      .||.|||.||...|||||||| |...:.|.||.:...:. 
  Rat    21 IIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHC-SGSKINVTLGAHNIKEQ- 83

  Fly   101 PYCLNNHCIPKFYNISVDMKIV-HENYNGITLQNDIALLRMSEAVEYSDYVRPICLLVGEQMQSI 164
                     .|...|...:||: |..||..|:.|||.||::....:.|..|:|:         ::
  Rat    84 ---------EKMQQIIPVVKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPL---------NL 130

  Fly   165 P----------MFTVTGWGET-EYGQFSRILLNATLYNMDISYCNIKFNKQADR-SQICAGSHTS 217
            |          :..|.|||:. ..|::|..|....|...:...|........|: ::||||....
  Rat   131 PRRNVKVKPGDVCYVAGWGKLGPMGKYSDTLQEVELTVQEDQKCESYLKNYFDKANEICAGDPKI 195

  Fly   218 N--TCKGDSGGPLSSKFHYGNRLLSFQYGLVSYGSERCAANVAGVYTNVSYHREWIFNKM 275
            .  :.:|||||||..|        ....|:||||..  ..:....:|.||....||...|
  Rat   196 KRASFRGDSGGPLVCK--------KVAAGIVSYGQN--DGSTPRAFTKVSTFLSWIKKTM 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30289NP_726081.1 Tryp_SPc 42..271 CDD:238113 71/249 (29%)
GzmbNP_612526.2 Tryp_SPc 21..244 CDD:238113 73/252 (29%)

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