DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30288 and CG18754

DIOPT Version :10

Sequence 1:NP_001097398.1 Gene:CG30288 / 246531 FlyBaseID:FBgn0050288 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster


Alignment Length:288 Identity:92/288 - (31%)
Similarity:133/288 - (46%) Gaps:56/288 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LVIVACLFIGIIRTESGRLLEN--DCGTTSSNGYRARIDGGRDAGMESNPWMVRVMISGKAVCGG 70
            :|.|.|       .|.|.:|.|  .||.|:. .:|.|  |..:|.:...||||.::...:.    
  Fly    79 MVYVCC-------PELGDVLPNKQTCGQTTP-VFRDR--GAENAELNEYPWMVLLLYENRL---- 129

  Fly    71 SLITARFVLTAEHCISPMYM--------NVRLGEYDTRHPIFDCDDFVCTPRAYNVDVDRKIVH- 126
            |||  |:||||.||:...|:        :|||||..|     ||..........:|:|.:..|| 
  Fly   130 SLI--RYVLTAAHCVIGGYLTQNDLVLKSVRLGESTT-----DCITSESRCPHLDVEVGQTTVHQ 187

  Fly   127 ---SNPG---YDIGLLRMQRSVIFSNYVRPICLILGKTLGGNPLSILRFNFTGWGTNSDGEEQDR 185
               |:.|   .||.|||:|..|.::..::||||:..:.    ||..|....:||......:   .
  Fly   188 GFTSSGGTYRNDIALLRLQFPVRYTKKIQPICLLDAEF----PLQDLNLQISGWDPTKSSQ---T 245

  Fly   186 LQTATLQQLPQWSC-ERPGRPLDISYICAGSY-ISDSCKGDSGGPLSAIRTFEGQG---RVFQFG 245
            |.|:|:::.....| .|.......|.:|||.. ..|:|.|.||.|:..|.   |.|   .||..|
  Fly   246 LITSTVKERNPADCLNRYPSFRSASQVCAGGQRKGDTCAGISGSPVMGIM---GSGVDEFVFLAG 307

  Fly   246 VASQGLRLC--SGL-GIYTNVTHFTDWI 270
            :||.|.:.|  :|: |:||.:.||::||
  Fly   308 IASYGQQYCYSAGIPGVYTKIGHFSEWI 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30288NP_001097398.1 Tryp_SPc 45..270 CDD:238113 78/247 (32%)
CG18754NP_652652.3 CLIP 36..84 CDD:463440 2/4 (50%)
Tryp_SPc 108..338 CDD:238113 80/249 (32%)

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