DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30288 and hpn

DIOPT Version :10

Sequence 1:NP_001097398.1 Gene:CG30288 / 246531 FlyBaseID:FBgn0050288 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001091657.2 Gene:hpn / 569259 ZFINID:ZDB-GENE-141212-373 Length:425 Species:Danio rerio


Alignment Length:284 Identity:83/284 - (29%)
Similarity:126/284 - (44%) Gaps:53/284 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RTESGRLLE---NDCGTTSSNGYRARIDGGRDAGMESNPWMVRVMISGKAVCGGSLITARFVLTA 81
            :.:.|::||   .|||.....  ..||.||.||...|.||.|.:...|...||||:|:.|::::|
Zfish   140 KCDKGQILEVICQDCGRRMLP--EERIVGGVDARQGSWPWQVSLQYDGVHQCGGSIISDRWIISA 202

  Fly    82 EHCISPMYMN-----VRLGEYDTRHPIFDCDDFVCTPRAYNV---DVDRKIVHS----------- 127
            .||....|.:     |.:|.      |::      ||...||   :|...:.||           
Zfish   203 AHCFPERYRHASRWRVLMGS------IYN------TPIRKNVVIAEVKTVVYHSSYLPFVDANID 255

  Fly   128 NPGYDIGLLRMQRSVIFSNYVRPICL-ILGKTLGGNPLSILRFNFTGWGTNSD--GEEQDRLQTA 189
            :...||.::.:.:.:.|::|::|:|| ..|:.|....:..:    |||| |.:  |.:.:.||.|
Zfish   256 DNSRDIAVISLTKPLQFTDYIQPVCLPTYGQRLADGQMGTV----TGWG-NVEYYGTQANVLQEA 315

  Fly   190 TLQQLPQWSCERP---GRPLDISYICAGSYI---SDSCKGDSGGPLSAIRTFEGQGRVFQFGVAS 248
            .:..:....|..|   ...:..:..||| |.   :|||:||||||..|........|....||.|
Zfish   316 HVPIISDAVCNGPDYYDNQVTTTMFCAG-YEKGGTDSCQGDSGGPFVAADVLSKTSRYRLLGVVS 379

  Fly   249 --QGLRLCSGLGIYTNVTHFTDWI 270
              .|..:....|:||.|:.|..||
Zfish   380 WGTGCAMAKKPGVYTRVSRFLPWI 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30288NP_001097398.1 Tryp_SPc 45..270 CDD:238113 73/254 (29%)
hpnNP_001091657.2 Hepsin-SRCR 53..160 CDD:462736 6/19 (32%)
Tryp_SPc 164..404 CDD:238113 76/258 (29%)

Return to query results.
Submit another query.