DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30288 and Cfd

DIOPT Version :10

Sequence 1:NP_001097398.1 Gene:CG30288 / 246531 FlyBaseID:FBgn0050288 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001071110.1 Gene:Cfd / 54249 RGDID:2498 Length:263 Species:Rattus norvegicus


Alignment Length:263 Identity:71/263 - (26%)
Similarity:114/263 - (43%) Gaps:54/263 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RARIDGGRDAGMESNPWMVRVMISGKAVCGGSLITARFVLTAEHCISPM----YMNVRLGEYDTR 100
            |.||.||::|...:.|:|..|.::|..||||:|:..::||:|.||:..:    .:.|.||.:...
  Rat    23 RGRILGGQEAMAHARPYMASVQVNGTHVCGGTLVDEQWVLSAAHCMDGVTKDEVVQVLLGAHSLS 87

  Fly   101 HPIFDCDDFVCTPRAYNVDVDRKIVHSNPGY-------DIGLLRMQRSVIFSNYVRPICL----- 153
            .|         .|..:..||...::|  ||.       |:.|.::..:.....:|||:.|     
  Rat    88 SP---------EPYKHLYDVQSVVLH--PGSRPDSVEDDLMLFKLSHNASLGPHVRPLPLQREDR 141

  Fly   154 -ILGKTLGGNPLSILRFNFTGWG-TNSDGEEQDRLQTATLQQLPQWSCE----RPGRPLDISYIC 212
             :...||         .:..||| ....|...|.||..|:..:.:.:|.    ..| .:..:.:|
  Rat   142 EVKPGTL---------CDVAGWGVVTHAGRRPDVLQQLTVSIMDRNTCNLRTYHDG-AITKNMMC 196

  Fly   213 AGSYISDSCKGDSGGPLSAIRTFEGQGRVFQFGVASQGLRLCSGL---GIYTNVTHFTDWILDVI 274
            |.|...|:|:|||||||......|        .|.:.|.|:|...   |::|.|..:..||.:|:
  Rat   197 AESNRRDTCRGDSGGPLVCGDAVE--------AVVTWGSRVCGNRRKPGVFTRVATYVPWIENVL 253

  Fly   275 QNH 277
            ..:
  Rat   254 SGN 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30288NP_001097398.1 Tryp_SPc 45..270 CDD:238113 65/249 (26%)
CfdNP_001071110.1 Tryp_SPc 26..252 CDD:238113 68/254 (27%)
Self-inhibitor loop. /evidence=ECO:0000250|UniProtKB:P00746 224..228 1/3 (33%)

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