DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30288 and prss60.2

DIOPT Version :10

Sequence 1:NP_001097398.1 Gene:CG30288 / 246531 FlyBaseID:FBgn0050288 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001099071.1 Gene:prss60.2 / 541408 ZFINID:ZDB-GENE-050320-109 Length:328 Species:Danio rerio


Alignment Length:313 Identity:91/313 - (29%)
Similarity:129/313 - (41%) Gaps:73/313 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RLPIRQLVIVACLFIGIIRTESGRLLE-NDCGTTSSNGYRARIDGGRDAGMESNPWMVRVMIS-- 63
            ||....|.::.|:        .|.|.: |.||....|   :||.||.:|...|.||.|.:...  
Zfish     3 RLTCATLTLLICV--------KGSLSQLNVCGQAPLN---SRIVGGVNAPEGSWPWQVSLQSPRY 56

  Fly    64 GKAVCGGSLITARFVLTAEHC---ISPMYMNVRLGEYDTRHPIFDCDDFVCTPRAYNV-----DV 120
            |...||||||::.:||||.||   :|...:.|.||..              |.:..|.     :|
Zfish    57 GGHFCGGSLISSEWVLTAAHCLPGVSESSLVVYLGRR--------------TQQGVNTHETSRNV 107

  Fly   121 DRKIVHSNPGY-------DIGLLRMQRSVIFSNYVRPICLILGKTL--GGNPLSILRFNFTGWGT 176
            .:.||||:  |       ||.|||:..:|.|::|:||:||....::  .|....|     ||||.
Zfish   108 AKIIVHSS--YNSNTNDNDIALLRLSSAVTFNDYIRPVCLAAQNSVYSAGTSSWI-----TGWGD 165

  Fly   177 NSDGEEQDRLQTATLQQLPQWSCERPGRPLDI-----SYICAG--SYISDSCKGDSGGPLSAIRT 234
            ...|.............:|..:.:|....|..     :.||||  ....|:|:||||||:..   
Zfish   166 VQAGVNLPAPGILQETMIPVVANDRCNAQLGSGTVTNNMICAGLAKGGKDTCQGDSGGPMVT--- 227

  Fly   235 FEGQGRV----FQFGVASQGLRLC--SGLGIYTNVTHFTDWILDVIQNHSDDF 281
                 |:    .|.|:.|.|....  :..|:||.|:.:..||...|..:...|
Zfish   228 -----RLCTVWIQAGITSWGYGCADPNSPGVYTRVSQYQSWISSKISQNQPGF 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30288NP_001097398.1 Tryp_SPc 45..270 CDD:238113 75/256 (29%)
prss60.2NP_001099071.1 Tryp_SPc 34..267 CDD:238113 78/261 (30%)
Somatomedin_B 296..326 CDD:470596
Blue background indicates that the domain is not in the aligned region.

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