DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30288 and Tmprss2

DIOPT Version :10

Sequence 1:NP_001097398.1 Gene:CG30288 / 246531 FlyBaseID:FBgn0050288 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_056590.2 Gene:Tmprss2 / 50528 MGIID:1354381 Length:490 Species:Mus musculus


Alignment Length:305 Identity:88/305 - (28%)
Similarity:133/305 - (43%) Gaps:79/305 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RQLVIVACLFIGIIRTESGRLLENDCGTTSSNGYRARIDGGRDAGMESNPWMVRVMISGKAVCGG 70
            |.:|.:.|:               :||..|.. .::||.||.:|.....||.|.:.:.|..||||
Mouse   233 RMVVSLRCI---------------ECGVRSVK-RQSRIVGGLNASPGDWPWQVSLHVQGVHVCGG 281

  Fly    71 SLITARFVLTAEHCI-----SPMYMNVRLG-------EYDTRHPIFDCDDFVCTPRAYNVDVDRK 123
            |:||..:::||.||:     ||.|.....|       .|.:||.:                  .|
Mouse   282 SIITPEWIVTAAHCVEEPLSSPRYWTAFAGILRQSLMFYGSRHQV------------------EK 328

  Fly   124 IVHSNPGY-------DIGLLRMQRSVIFSNYVRPICLILGKTLGGNPLSILRFN----FTGWG-T 176
            :: |:|.|       ||.|:::|..:.|::.|:|:||       .||..:|..:    .:||| |
Mouse   329 VI-SHPNYDSKTKNNDIALMKLQTPLAFNDLVKPVCL-------PNPGMMLDLDQECWISGWGAT 385

  Fly   177 NSDGEEQDRLQTATLQQLPQWSCERP---GRPLDISYICAGSYIS---DSCKGDSGGPLSAIRTF 235
            ...|:..|.|..|.:..:....|...   ...:..:.|||| ::.   |||:|||||||..::  
Mouse   386 YEKGKTSDVLNAAMVPLIEPSKCNSKYIYNNLITPAMICAG-FLQGSVDSCQGDSGGPLVTLK-- 447

  Fly   236 EGQGRVFQFGVASQGLRLCSGL--GIYTNVTHFTDWILDVIQNHS 278
              .|..:..|..|.|......|  |:|.|||.|||||...::.:|
Mouse   448 --NGIWWLIGDTSWGSGCAKALRPGVYGNVTVFTDWIYQQMRANS 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30288NP_001097398.1 Tryp_SPc 45..270 CDD:238113 77/256 (30%)
Tmprss2NP_056590.2 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747 5/28 (18%)
Tryp_SPc 254..485 CDD:238113 80/261 (31%)
Blue background indicates that the domain is not in the aligned region.

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