DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30288 and hgfa

DIOPT Version :10

Sequence 1:NP_001097398.1 Gene:CG30288 / 246531 FlyBaseID:FBgn0050288 Length:282 Species:Drosophila melanogaster
Sequence 2:XP_005164799.1 Gene:hgfa / 493781 ZFINID:ZDB-GENE-041014-2 Length:712 Species:Danio rerio


Alignment Length:289 Identity:68/289 - (23%)
Similarity:107/289 - (37%) Gaps:72/289 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 CGTTSSNGYR--------------ARIDGG-RDAGMESNPWMVRVMISGKAVCGGSLITARFVLT 80
            |.:.||:.::              .||.|| |....|...|:|.:....:..||||||...:|||
Zfish   451 CKSMSSDDHQMSGGPKPSCFIHKTTRIVGGMRVQRAEDGSWVVSIQKGNRHWCGGSLIREEWVLT 515

  Fly    81 AEHCISPMYMNVRLGEYDTRHPIFDCDDFVCTPRAYNVDVDRKIVHSN----------------- 128
            .:.|.|                       .|.|......|...::|.|                 
Zfish   516 DQQCFS-----------------------TCVPDLSEYTVQVGLLHLNASAGTQALRIAHVVCGP 557

  Fly   129 PGYDIGLLRMQRSVIFSNYVRPICL-ILGKTLGGNPLSILRFNFTGWGTNSDGEEQDRLQTATLQ 192
            .|.::.||::......|.:||.:.| :.|..:....|.::    .|||.......:..|:...|.
Zfish   558 EGSNLALLKLTTPAPLSEHVRTVQLPVAGCAVAEGTLCLM----YGWGDTKGTGHEGSLKMVGLP 618

  Fly   193 QLPQWSCERPGR---PLDISYICAGSYISDS-CKGDSGGPLSAIRTFEGQGRVFQFGVASQGLRL 253
            .:....|.:...   |:..:.||||...... |:.|.||||..   .||:.:|. .||:..| |.
Zfish   619 IVSNKRCSQSHNGILPITETKICAGGKRDQGVCEKDYGGPLVC---QEGESKVI-VGVSING-RG 678

  Fly   254 CSGL---GIYTNVTHFTDWILDVIQNHSD 279
            |:..   .::.||..:::||..|.:.:||
Zfish   679 CAVARRPAVFVNVAFYSEWIRKVFKYYSD 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30288NP_001097398.1 Tryp_SPc 45..270 CDD:238113 58/250 (23%)
hgfaXP_005164799.1 PAN_AP_HGF <50..107 CDD:238532
KR 111..192 CDD:238056
KR 195..275 CDD:214527
KR 287..367 CDD:214527
KR 374..451 CDD:214527 68/289 (24%)
Tryp_SPc 477..701 CDD:238113 61/255 (24%)
Blue background indicates that the domain is not in the aligned region.

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