DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30288 and Tmprss11c

DIOPT Version :10

Sequence 1:NP_001097398.1 Gene:CG30288 / 246531 FlyBaseID:FBgn0050288 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001399454.1 Gene:Tmprss11c / 408213 RGDID:1302967 Length:431 Species:Rattus norvegicus


Alignment Length:272 Identity:79/272 - (29%)
Similarity:125/272 - (45%) Gaps:56/272 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LLENDCG--TTSSNGYRARIDGGRDAGMESNPWMVRVMISGKAVCGGSLITARFVLTAEHCI--- 85
            ||...||  |.:..|:  ::.||:||.....||...:..:....||.:||:..:::||.||.   
  Rat   183 LLNTCCGRRTITPGGH--KVAGGQDAEEGEWPWQASLQQNNVHRCGATLISNSWLITAAHCFVRS 245

  Fly    86 -SPMYMNVRLGEYDTRHPIFDCDDFVCT-PRAYNVDVDRKIVHSNPGY-----DIGLLRMQRSVI 143
             :|....|..|             |:.: |:|... |...::|.|..|     ||.::|:...|:
  Rat   246 ANPKDWKVSFG-------------FLLSKPQAQRA-VKSIVIHENYSYPAHNNDIAVVRLSSPVL 296

  Fly   144 FSNYVRPICLILGKTLGGNPLSILRFN------FTGWGT-NSDGEEQDRLQTATLQQLPQWSC-- 199
            :.|.:|..||         |.:..:|.      .||||| .|||:..:.||...::.:...:|  
  Rat   297 YENNIRRACL---------PEATQKFPPNSDVVVTGWGTLKSDGDSPNILQKGRVKIIDNKTCNS 352

  Fly   200 -ERPGRPLDISYICAGSYIS---DSCKGDSGGPLSAIRTFEGQGRVFQFGVASQG--LRLCSGLG 258
             :..|..:....:||| ::.   |:|:|||||||.   :.:.:|..|..|:.|.|  ..|.:..|
  Rat   353 GKAYGGVITPGMLCAG-FLEGRVDACQGDSGGPLV---SEDSKGIWFLAGIVSWGDECALPNKPG 413

  Fly   259 IYTNVTHFTDWI 270
            :||.|||:.|||
  Rat   414 VYTRVTHYRDWI 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30288NP_001097398.1 Tryp_SPc 45..270 CDD:238113 71/249 (29%)
Tmprss11cNP_001399454.1 SEA 62..161 CDD:460188
Tryp_SPc 200..428 CDD:238113 73/253 (29%)
Blue background indicates that the domain is not in the aligned region.

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