DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30288 and Hpn

DIOPT Version :10

Sequence 1:NP_001097398.1 Gene:CG30288 / 246531 FlyBaseID:FBgn0050288 Length:282 Species:Drosophila melanogaster
Sequence 2:XP_038958886.1 Gene:Hpn / 29135 RGDID:61982 Length:539 Species:Rattus norvegicus


Alignment Length:304 Identity:91/304 - (29%)
Similarity:128/304 - (42%) Gaps:54/304 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LPIRQLVIVACLFIGIIRTESGRLLE---NDCGTTSSNGYRA----RIDGGRDAGMESNPWMVRV 60
            ||:.|.::..   |.:.....||.|.   .|||.      |.    ||.||:|:.:...||.|.:
  Rat   166 LPLAQRLLDV---ISVCDCPRGRFLTATCQDCGR------RKLPVDRIVGGQDSSLGRWPWQVSL 221

  Fly    61 MISGKAVCGGSLITARFVLTAEHCISPMYMNVRLGEYDTRHPIFDCDDFVCTPRAYNVDVDRKIV 125
            ...|..:|||||::..:||||.||. |....|.     :|..:|.......:|.|..:.|...|.
  Rat   222 RYDGTHLCGGSLLSGDWVLTAAHCF-PERNRVL-----SRWRVFAGAVARTSPHAVQLGVQAVIY 280

  Fly   126 HSNPGY-------------DIGLLRMQRSVIFSNYVRPICL-ILGKTL-GGNPLSILRFNFTGWG 175
            |.  ||             ||.|:.:..|:..:.|::|:|| ..|:.| .|...::     ||||
  Rat   281 HG--GYLPFRDPTIDENSNDIALVHLSSSLPLTEYIQPVCLPAAGQALVDGKVCTV-----TGWG 338

  Fly   176 -TNSDGEEQDRLQTATLQQLPQWSCERP---GRPLDISYICAGSYIS---DSCKGDSGGPLSAIR 233
             |...|::...||.|.:..:....|..|   |..:.....||| |..   |:|:||||||.....
  Rat   339 NTQFYGQQAVVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAG-YPEGGIDACQGDSGGPFVCED 402

  Fly   234 TFEGQGRVFQFGVAS--QGLRLCSGLGIYTNVTHFTDWILDVIQ 275
            ...|..|....|:.|  .|..|....|:||.|..|.:||...|:
  Rat   403 RISGTSRWRLCGIVSWGTGCALARKPGVYTKVIDFREWIFQAIK 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30288NP_001097398.1 Tryp_SPc 45..270 CDD:238113 75/248 (30%)
HpnXP_038958886.1 Hepsin-SRCR 92..200 CDD:462736 11/42 (26%)
Tryp_SPc 204..441 CDD:238113 76/250 (30%)

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