DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30288 and Gzmbl3

DIOPT Version :10

Sequence 1:NP_001097398.1 Gene:CG30288 / 246531 FlyBaseID:FBgn0050288 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001316809.2 Gene:Gzmbl3 / 120766154 RGDID:2320502 Length:214 Species:Rattus norvegicus


Alignment Length:247 Identity:68/247 - (27%)
Similarity:93/247 - (37%) Gaps:79/247 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 SGKAVCGGSLITARFVLTAEHCISPMYMNVRLGEYDTR----------------HPIFDCDDFVC 111
            |...:|||.||...|||||.|| |...:||.||.::.:                ||         
  Rat    11 SRDTICGGFLIREDFVLTAAHC-SGSKINVTLGAHNIKEREKTQQVIPVVKIIPHP--------- 65

  Fly   112 TPRAYNVDVDRKIVHSNPGYDIGLLRMQRSVIFSNYVRPICLILGKTLGGNPLSILRFNF----- 171
               |||.    |.: ||   ||.||:::.....::.|:             ||::.|.||     
  Rat    66 ---AYNA----KTI-SN---DIMLLKLKSKAKRTSTVK-------------PLNLPRSNFKVKPG 106

  Fly   172 -----TGWG-TNSDGEEQDRLQTATLQQLPQWSCERPGRPLDISY-----ICAG--SYISDSCKG 223
                 .||| ....|:..|.||...|.......||   ..|..:|     ||||  .....|.:|
  Rat   107 DVCYVAGWGKLGPMGKFPDTLQEVELTVQEDQECE---TYLKNAYDKANQICAGDPKIKRASFQG 168

  Fly   224 DSGGPLSAIRTFEGQGRVFQFGVASQGLRLCSGLGIYTNVTHFTDWILDVIQ 275
            .|||||..        :....|:.|.|.:..|....:|.|:.|..||.:.::
  Rat   169 ASGGPLVC--------KKVAAGIVSYGRKDGSTPRAFTKVSTFLSWIEETMK 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30288NP_001097398.1 Tryp_SPc 45..270 CDD:238113 66/240 (28%)
Gzmbl3NP_001316809.2 None

Return to query results.
Submit another query.