DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30288 and LOC100491119

DIOPT Version :10

Sequence 1:NP_001097398.1 Gene:CG30288 / 246531 FlyBaseID:FBgn0050288 Length:282 Species:Drosophila melanogaster
Sequence 2:XP_004916446.1 Gene:LOC100491119 / 100491119 XenbaseID:XB-GENE-29080535 Length:512 Species:Xenopus tropicalis


Alignment Length:286 Identity:87/286 - (30%)
Similarity:135/286 - (47%) Gaps:46/286 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IGIIRTESGRLLE-NDCGTTSSNGYRARIDGGRDAGMESNPWMVRVMISGKAVCGGSLITARFVL 79
            :.|..|:.|..|: .|||..|.:  ..||.||.|:.:...||.|.:...|:.:||||:|::::|:
 Frog   249 VDICPTQEGVSLQCTDCGQASVD--IPRIVGGTDSSLGKWPWQVSLRWDGRHMCGGSIISSQWVM 311

  Fly    80 TAEHC-ISPMYMNVRLGEYDTRHPIFDCDDFVCTPRAYNVDVDRKIVHS------NPGYDIGLLR 137
            :|.|| :...::.|      :|..|......:.|..||:|   |.|.::      ...||:.||:
 Frog   312 SAAHCFVLNGFLTV------SRWKIHAGSISLSTGIAYSV---RNIYYNGLYSLETNDYDVALLK 367

  Fly   138 MQRSVIFSNYVRPICLILGKTLGGNPLSILRFNFT------GWGTNSDGEE-QDRLQTATLQQLP 195
            ....:.||:..||:||         |.:..:|..|      |||..|:|.: ...||.|.:|.:.
 Frog   368 TTVPMSFSDTTRPVCL---------PRAYQQFQVTANCWIIGWGHVSEGGQLSPVLQEAKVQLIS 423

  Fly   196 QWSCERPGR---PLDISYICAG--SYISDSCKGDSGGPLSAIRTFEGQGRVFQFGVAS--QGLRL 253
            ...|.....   .:....:|||  ...:|||:|||||||..   .|| |..:|.|:.|  :|...
 Frog   424 SQICNHSSNYAGQISPRMLCAGYPDGRADSCQGDSGGPLVC---QEG-GLWWQVGIVSWGEGCGR 484

  Fly   254 CSGLGIYTNVTHFTDWILDVIQNHSD 279
            .:..|:|||:|...||:...:|..|:
 Frog   485 PNRPGVYTNLTEVLDWVYHRLQMDSE 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30288NP_001097398.1 Tryp_SPc 45..270 CDD:238113 74/245 (30%)
LOC100491119XP_004916446.1 SRCR_2 172..269 CDD:470597 7/19 (37%)
Tryp_SPc 275..501 CDD:238113 75/247 (30%)

Return to query results.
Submit another query.