DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30288 and hgfb

DIOPT Version :10

Sequence 1:NP_001097398.1 Gene:CG30288 / 246531 FlyBaseID:FBgn0050288 Length:282 Species:Drosophila melanogaster
Sequence 2:XP_073785930.1 Gene:hgfb / 100334116 ZFINID:ZDB-GENE-041014-3 Length:714 Species:Danio rerio


Alignment Length:267 Identity:67/267 - (25%)
Similarity:101/267 - (37%) Gaps:61/267 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RARIDGGRDAGMESNPWMVRVMISGKAVCGGSLITARFVLTAEHCIS---PMYMNVRL------- 94
            :.||.||....::...|||.:.......|||:|:...:|||.:.|.|   |.....|:       
Zfish   473 QVRIVGGGPVPIKEGSWMVSIQKGSSHWCGGALVREEWVLTDKDCFSSCVPDLSEYRVWLGITHL 537

  Fly    95 ---GEYDTRHPIFDCDDFVCTPRAYNVDVDRKIVHSNPGYD---IGLLRMQRSVIFSNYVRPI-- 151
               ||.|....                  :|:|.|...|.:   :.|||:.:..:.|..||.|  
Zfish   538 NESGENDFHRQ------------------ERRISHVICGPEDSSLALLRLSQPALPSERVRVIQL 584

  Fly   152 ----CLILGKTLGGNPLSILRFNFTGWGTNSDGEEQDRLQTATLQQLPQWSCERPGR---PLDIS 209
                |.|...|:         .:..|||.......:..|:...|..:....|::..|   |:..|
Zfish   585 PVADCSIQEDTI---------CSVYGWGETKGTGHEGTLKRVHLPIVSNERCQQLHRGTLPITSS 640

  Fly   210 YICAGSYISDS-CKGDSGGPLSAIRTFEGQGRVFQFGVASQGLRLC---SGLGIYTNVTHFTDWI 270
            .:|||....:. |:.|.||||..   .|...:|. .||:..| |.|   :...|:.||..:..||
Zfish   641 KLCAGGRRDEGVCEKDYGGPLVC---QESNSKVI-VGVSING-RGCARHNRPAIFVNVAFYAGWI 700

  Fly   271 LDVIQNH 277
            ..|.:|:
Zfish   701 HKVYRNY 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30288NP_001097398.1 Tryp_SPc 45..270 CDD:238113 61/253 (24%)
hgfbXP_073785930.1 None

Return to query results.
Submit another query.