DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30288 and tmprss3a

DIOPT Version :10

Sequence 1:NP_001097398.1 Gene:CG30288 / 246531 FlyBaseID:FBgn0050288 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001429713.1 Gene:tmprss3a / 100000148 ZFINID:ZDB-GENE-070912-70 Length:543 Species:Danio rerio


Alignment Length:260 Identity:83/260 - (31%)
Similarity:120/260 - (46%) Gaps:43/260 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 CGTTSSNGYRARIDGGRDAGMESNPWMVRVMISGKAVCGGSLITARFVLTAEHCI----SPMYMN 91
            ||  |...:.|||.||..:.....||.|.:....:.:||||:||:|::|||.||:    .|||..
Zfish   288 CG--SRPKFSARIVGGNLSAEGQFPWQVSLHFQNEHLCGGSIITSRWILTAAHCVYGIAYPMYWM 350

  Fly    92 VRLGEYDTRHPIFDCDDFVCTPRAYNVDVDRKIVHS--NP---GYDIGLLRMQRSVIFSNYVRPI 151
            |..|.  |..|:.....|.         |::.|.||  .|   .:||.|:::.:.:.|:..|.||
Zfish   351 VYAGL--TELPLNAVKAFA---------VEKIIYHSRYRPKGLDHDIALMKLAQPLTFNGMVEPI 404

  Fly   152 CL-ILGKTLGGNPLSILRFNFTGWGTNSDGEEQDRLQ-TATLQQLPQWSCERP----GRPLDISY 210
            || ..|:......:..:    :|||...||.:....| .|::..:...:|.:|    |. |....
Zfish   405 CLPNFGEQFEDGKMCWI----SGWGATEDGGDASVSQHCASVPLISNKACSQPEVYQGY-LTAGM 464

  Fly   211 ICAGSYI---SDSCKGDSGGPLSAIRTFEGQGRVFQFGVAS--QGLRLCSGLGIYTNVTHFTDWI 270
            |||| |:   :|||:|||||||:.    |........|..|  ||....:..|:||.:|....||
Zfish   465 ICAG-YLDGGTDSCQGDSGGPLAC----EDSSIWKLVGATSWGQGCAEKNKPGVYTRITQSLTWI 524

  Fly   271  270
            Zfish   525  524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30288NP_001097398.1 Tryp_SPc 45..270 CDD:238113 75/244 (31%)
tmprss3aNP_001429713.1 None

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