DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30287 and CG34436

DIOPT Version :10

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_001097954.1 Gene:CG34436 / 5740743 FlyBaseID:FBgn0085465 Length:270 Species:Drosophila melanogaster


Alignment Length:263 Identity:80/263 - (30%)
Similarity:120/263 - (45%) Gaps:33/263 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QGQPHLLDPQCVTARSEPGLYRVINGKPADLFSNPWMVIIIERGMMKCGGSLITPRYVLTAAHCK 84
            ||...|||..|..      :.|:.|.   .:||.|||.:::... ..|.|:||...:|:|:|.|.
  Fly    17 QGSAQLLDQNCAE------VSRLSND---IIFSRPWMALVLLPN-KTCSGALIHKYFVITSASCV 71

  Fly    85 SETKSQLTVRLGDYDVNQ--AVDCSSYGCIPRPREINVTRTYVPSHY--TNFRKNDIALLRLETT 145
            . .:.:..||||...:.|  .|..||       .:.:|...|:...|  :|| ::|||||.|:..
  Fly    72 F-NQERAIVRLGQLSIKQEHIVSYSS-------DDYHVQSAYIHRFYEKSNF-EHDIALLELQND 127

  Fly   146 VQYGDNIRSICLLMGDYTWSSNILKNLVKFNTTGWGRTESRINSPVLQQASLTHHHLSYCAQVFG 210
            |.|..:||.|||.:......:.:.|   ::.|..||..|..| .|..:.:.:.|.....|...|.
  Fly   128 VLYKAHIRPICLWLDKSDIDTQMFK---RYETFRWGIDEKYI-LPAAKTSKIKHISQVKCENAFK 188

  Fly   211 KQLDKSHICVASSTGSTCQGDSGGPLTARVRIGSERRVILFGVVSYGAVH-CFGPTVYTNVIHFA 274
            .....||||......|.|. ::|.||..::|..::.|..|||:.|||... |    :||:|..:.
  Fly   189 LYPQNSHICAGYKNKSKCV-ETGSPLFKKIRYYTKIRYTLFGIQSYGESRTC----LYTDVTKYI 248

  Fly   275 NWI 277
            :||
  Fly   249 DWI 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 42..280 CDD:238113 73/241 (30%)
CG34436NP_001097954.1 Tryp_SPc 40..252 CDD:473915 71/231 (31%)

Return to query results.
Submit another query.