DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30287 and ctrb.3

DIOPT Version :10

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_001017724.1 Gene:ctrb.3 / 550419 ZFINID:ZDB-GENE-050417-229 Length:265 Species:Danio rerio


Alignment Length:286 Identity:84/286 - (29%)
Similarity:131/286 - (45%) Gaps:45/286 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLLIALVFLKVQ---GQPHLLDPQCVTARSEPGLYRVINGKPADLFSNPWMVIIIE-RGMMKCG 68
            |.||..:.|....   |.|.:  |..|:     |..|::||:.|...|.||.|.:.: .|...||
Zfish     4 LWLLSCVAFFSAAYGCGVPAI--PPVVS-----GYARIVNGEEAVPHSWPWQVSLQDFTGFHFCG 61

  Fly    69 GSLITPRYVLTAAHCKSETKSQLTVRLGDYD---VNQAVDCSSYGCIPRPREINVTRTYV-PSHY 129
            ||||...:|:|||||...|..:  |.||:::   .|...|..:         :.|::.:. |.:.
Zfish    62 GSLINEFWVVTAAHCSVRTSHR--VILGEHNKGKSNTQEDIQT---------MKVSKVFTHPQYN 115

  Fly   130 TNFRKNDIALLRLETTVQYGDNIRSICLLMGDYTWSSNILKNLVKFNTTGWGRTESRINS----P 190
            :|..:|||||::|........::..:||......::|.     :...|:|||.|  |.|:    .
Zfish   116 SNTIENDIALVKLTAPASLNAHVSPVCLAEASDNFASG-----MTCVTSGWGVT--RYNALFTPD 173

  Fly   191 VLQQASLTHHHLSYCAQVFGKQLDKSHICVASSTGSTCQGDSGGPLTARVRIGSERRVILFGVVS 255
            .|||.:|.......|...:|..:..:.||..::..|:|.|||||||..:    .:....|.|:||
Zfish   174 ELQQVALPLLSNEDCKNHWGSNIRDTMICAGAAGASSCMGDSGGPLVCQ----KDNIWTLVGIVS 234

  Fly   256 YGAVHCFGPT---VYTNVIHFANWIE 278
            :|:..| .||   ||..|....:|::
Zfish   235 WGSSRC-DPTMPGVYGRVTELRDWVD 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 42..280 CDD:238113 74/249 (30%)
ctrb.3NP_001017724.1 Tryp_SPc 33..258 CDD:214473 74/247 (30%)

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