DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30287 and Hgfac

DIOPT Version :10

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:XP_006504094.1 Gene:Hgfac / 54426 MGIID:1859281 Length:658 Species:Mus musculus


Alignment Length:266 Identity:74/266 - (27%)
Similarity:112/266 - (42%) Gaps:55/266 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RVINGKPADLFSNPWMVIIIERGMMKCGGSLITPRYVLTAAHC--KSETKSQLTVRLGDYDVNQA 103
            |:|.|..:...|:||:..|. .|...|.|||:...:|::||||  .|..:..:||.||.:..|:.
Mouse   405 RIIGGSSSLPGSHPWLAAIY-IGNSFCAGSLVHTCWVVSAAHCFANSPPRDSITVVLGQHFFNRT 468

  Fly   104 VDCSSYGCIPRPREINVTRT-----YVP-SHYTNFRKN--DIALLRL----ETTVQYGDNIRSIC 156
            .|              ||:|     ||| :.|:.|..|  |:.|:||    |........::.||
Mouse   469 TD--------------VTQTFGIEKYVPYTLYSVFNPNNHDLVLIRLKKKGERCAVRSQFVQPIC 519

  Fly   157 LLMGDYTWSSNILKNLVKFNTTGWGRTE---------SRINSPVLQQASLTHHHLSYCAQVFGKQ 212
            |.....::.:.     .|....|||..:         |..||.:.....|...|.....:|:|..
Mouse   520 LPEAGSSFPTG-----HKCQIAGWGHMDEMQSSTDVSSYSNSLLEALVPLVADHKCSSPEVYGAD 579

  Fly   213 LDKSHICVA--SSTGSTCQGDSGGPLTARVRIGSERRVI--LFGVVSY--GAVHCFGPTVYTNVI 271
            :..:.:|..  ......|||||||||..      |:..:  |:|::|:  |......|.|||.|.
Mouse   580 ISPNMLCAGYFDCKSDACQGDSGGPLVC------EKNGVAYLYGIISWGDGCGRLNKPGVYTRVA 638

  Fly   272 HFANWI 277
            ::.:||
Mouse   639 NYVDWI 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 42..280 CDD:238113 73/265 (28%)
HgfacXP_006504094.1 FN2 99..145 CDD:128373
EGF_CA 159..194 CDD:238011
FN1 197..237 CDD:238018
EGF_CA 242..275 CDD:238011
Kringle 283..364 CDD:395005
Tryp_SPc 406..646 CDD:238113 73/265 (28%)
Blue background indicates that the domain is not in the aligned region.

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