DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30287 and tmprss2

DIOPT Version :10

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_001008623.1 Gene:tmprss2 / 494080 ZFINID:ZDB-GENE-041212-48 Length:486 Species:Danio rerio


Alignment Length:240 Identity:77/240 - (32%)
Similarity:107/240 - (44%) Gaps:29/240 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 PWMVIIIERGMMKCGGSLITPRYVLTAAHCKSETKSQ--LTVRLGDYDVNQAVDCSSYGCIPRPR 116
            ||.|.:...|...||||:|||.::||||||..:..:.  .||..|....::....|..       
Zfish   265 PWQVSLHYSGRHLCGGSIITPYWILTAAHCVHQFSNPGGWTVYAGYLTQSEMASASGN------- 322

  Fly   117 EINVTRTYVPSHYTNFRKNDIALLRLETTVQYGDNIRSICLLMGDYTWSSNILKNLVKFNTTGWG 181
              :|.|..:.....|..:|||||:||.|.:....|||.:||.....::::.     .....||||
Zfish   323 --SVNRIVIHDFNPNTNENDIALMRLNTALTISTNIRPVCLPNKGMSFTAQ-----QDCYVTGWG 380

  Fly   182 RTES-RINSPVLQQASLTHHHLSYC--AQVFGKQLDKSHICVASSTG--STCQGDSGGPLTARVR 241
            ...| ..:|..||:|.:.....:.|  ..|:...:..:.||.....|  .:|||||||||...||
Zfish   381 ALFSGGSSSATLQEAKIQLIDSTICNSRPVYNGLITDTMICAGKLAGGVDSCQGDSGGPLVTNVR 445

  Fly   242 IGSERRVILFGVVSYG---AVHCFGPTVYTNVIHFANWIELHTKK 283
                ....|.|..|:|   ||. ..|.||.||.:|.:||....:|
Zfish   446 ----SLWWLLGDTSWGDGCAVR-NKPGVYGNVTYFLDWIYQQMRK 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 42..280 CDD:238113 76/235 (32%)
tmprss2NP_001008623.1 DUF3824 <18..>77 CDD:372351
LDLa 132..168 CDD:238060
SRCR_2 173..248 CDD:470597
Tryp_SPc 252..482 CDD:238113 76/235 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.