DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30287 and grass

DIOPT Version :10

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster


Alignment Length:254 Identity:85/254 - (33%)
Similarity:130/254 - (51%) Gaps:20/254 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RVINGKPADLFSNPWMVII----IERGMMKCGGSLITPRYVLTAAHCKSETKSQL-TVRLGDYDV 100
            ||.||....|.|.|||.::    .......|||::|:.||:||||||....::.| .:|||::.:
  Fly   118 RVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQNDLYEIRLGEHRI 182

  Fly   101 NQAVDCSSYG----CIPRPREINVTRTYVPSHY-TNFRKNDIALLRLETTVQYGDNIRSICLLMG 160
            :...||...|    |.|....:.:.:..:...| .....:|||||:|..:|.:..:|:.|||.:.
  Fly   183 STEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPIT 247

  Fly   161 DYTWSSNILKNLVKFNTTGWGRTESRINSPVLQQASLTHHHLSYCAQVFGKQLDKSHICV-ASST 224
            |..  ....:.:..:..||||.||:..:|.||.||::.....|.|:|.:.:.:..|.:|| ....
  Fly   248 DEL--KEKAEQISTYFVTGWGTTENGSSSDVLLQANVPLQPRSACSQAYRRAVPLSQLCVGGGDL 310

  Fly   225 GSTCQGDSGGPLTARVRIGSE--RRVILFGVVSYGAVHCFG----PTVYTNVIHFANWI 277
            ..:|:|||||||.|..:...|  .:::.||:||.|.|.| |    |.:||||..:..||
  Fly   311 QDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTC-GQISLPGLYTNVGEYVQWI 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 42..280 CDD:238113 84/253 (33%)
grassNP_651543.1 CLIP 32..90 CDD:197829
Tryp_SPc 121..371 CDD:238113 83/251 (33%)
Blue background indicates that the domain is not in the aligned region.

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