DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30287 and ea

DIOPT Version :10

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_524362.2 Gene:ea / 41858 FlyBaseID:FBgn0000533 Length:392 Species:Drosophila melanogaster


Alignment Length:287 Identity:96/287 - (33%)
Similarity:138/287 - (48%) Gaps:49/287 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LDPQCVTARSEPGLYRVINGKPADLFSNPWMVIII------ERGMMKCGGSLITPRYVLTAAHCK 84
            |..||....|.    |:..|....:...|||.:|.      ::| ..||||||:.|||:||:||.
  Fly   116 LPGQCGNILSN----RIYGGMKTKIDEFPWMALIEYTKSQGKKG-HHCGGSLISTRYVITASHCV 175

  Fly    85 S----ETKSQLT-VRLGDYDVNQAVDC-----SSYGCIPRPREINVTRT-----YVPSHYTNFRK 134
            :    .|..:|: ||||::|.|...||     ....|.|...::.|.||     |:|:  :..:.
  Fly   176 NGKALPTDWRLSGVRLGEWDTNTNPDCEVDVRGMKDCAPPHLDVPVERTIPHPDYIPA--SKNQV 238

  Fly   135 NDIALLRLETTVQYGDNIRSICLLMGDYTWSSNILKNLVKFNTTGWGRTESRINSPVLQQASLTH 199
            ||||||||...|:|.|.:|.|||.: |....|..... :..:..|||:||....|.:..:|::..
  Fly   239 NDIALLRLAQQVEYTDFVRPICLPL-DVNLRSATFDG-ITMDVAGWGKTEQLSASNLKLKAAVEG 301

  Fly   200 HHLSYCAQVFGKQ---LDKSHICVASSTG-STCQGDSGGPLTARVRIGSERRVI-----LFGVVS 255
            ..:..|..|:..|   |:.:.:|.....| .:|:|||||||     ||.:...:     |.||||
  Fly   302 FRMDECQNVYSSQDILLEDTQMCAGGKEGVDSCRGDSGGPL-----IGLDTNKVNTYYFLAGVVS 361

  Fly   256 YGAVHCFG----PTVYTNVIHFANWIE 278
            :|...| |    |.|||.|..:.:||:
  Fly   362 FGPTPC-GLAGWPGVYTLVGKYVDWIQ 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 42..280 CDD:238113 91/271 (34%)
eaNP_524362.2 CLIP 37..89 CDD:463440
Tryp_SPc 128..389 CDD:238113 91/271 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.