DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30287 and CG17571

DIOPT Version :9

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_001286096.1 Gene:CG17571 / 35409 FlyBaseID:FBgn0259998 Length:258 Species:Drosophila melanogaster


Alignment Length:286 Identity:86/286 - (30%)
Similarity:129/286 - (45%) Gaps:55/286 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLLIALVFLKVQGQPHLLDPQCVTARSEPGL----YRVINGKPADLFSNPWMVII-IERGMMKC 67
            ||.::|||.|            ..:....|||    .|::||:..|:.:.|:.|.: ..:|...|
  Fly     5 LLSVVALVAL------------AASCHGNPGLDFPFGRIVNGEDVDIENYPYQVSVQTTKGSHFC 57

  Fly    68 GGSLITPRYVLTAAHC-KSETKSQLTVRLGDYDVNQAVDCSSYGCIPRPREINVTRT--YVPSHY 129
            |||||....||||||| :|...|:|.||:|      :...||.|      |:...|.  |...:.
  Fly    58 GGSLIDSETVLTAAHCMQSYAASELQVRVG------STSRSSGG------EVVTVRAFKYHEGYN 110

  Fly   130 TNFRKNDIALLRLETTVQYGDNIRSICLLMGDYTWSSNILKNLVKFNTTGWGRTESRI-NSP-VL 192
            :....||:|:::|.:.|:....||:|.|...:....:|.:       .:|||.|.... :|| .|
  Fly   111 SKLMINDVAIIKLSSPVRQTSKIRAIELADSEAVSGTNAV-------VSGWGTTCFLFCSSPDTL 168

  Fly   193 QQASLTHHHLSYCA---QVFGK-QLDKSHICVASSTGSTCQGDSGGPLTARVRIGSERRVILFGV 253
            |:..:...|...||   ..:|. .:.::.:|........|||||||||.|..:        |.||
  Fly   169 QKVEVDLLHYKDCAADTYNYGSDSILETMVCATGEKKDACQGDSGGPLVADNK--------LVGV 225

  Fly   254 VSYGAVHCFG--PTVYTNVIHFANWI 277
            ||:|:...:.  |.||.:|....:||
  Fly   226 VSWGSGCAWTGYPGVYADVASLRSWI 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 41..277 CDD:214473 75/247 (30%)
Tryp_SPc 42..280 CDD:238113 76/248 (31%)
CG17571NP_001286096.1 Tryp_SPc 30..251 CDD:214473 75/247 (30%)
Tryp_SPc 31..254 CDD:238113 76/248 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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