DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30287 and CG5390

DIOPT Version :10

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_609374.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster


Alignment Length:272 Identity:78/272 - (28%)
Similarity:121/272 - (44%) Gaps:80/272 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 PWMVIII-ERG---MMKCGGSLITPRYVLTAAHC-KSETKSQLTVRLGDYDVNQAVDCSSYGCIP 113
            |||:.|: |.|   :.:|||:||.|..||||||| .::..|.:.||.|::|.....:.       
  Fly   161 PWMLAILREEGNLNLYECGGALIAPNVVLTAAHCVHNKQPSSIVVRAGEWDTQTQTEI------- 218

  Fly   114 RPREINVTRTYVPSHYTNFRK----NDIALLRLETTVQYGDNIRSICL-LMGDYTWSSNILKNLV 173
            |..|....:..:  ::..|.|    ||:|::.||:.....:||:::|| .:||            
  Fly   219 RRHEDRYVKEII--YHEQFNKGSLYNDVAVMLLESPFTLQENIQTVCLPNVGD------------ 269

  Fly   174 KFN-----TTGWGRTE-----------SRINSPV---------LQQASLTHH---HLSY-CAQVF 209
            ||:     .||||:.:           .:::.||         |::..|..|   |.|: ||   
  Fly   270 KFDFDRCYATGWGKNKFGKDGEYQVILKKVDMPVVPEQQCETNLRETRLGRHFILHDSFICA--- 331

  Fly   210 GKQLDKSHICVASSTGSTCQGDSGGPLTARVRIGSERRVILFGVVSYGAVHCFG----PTVYTNV 270
            |.:.||          .||:||.|.||...: .|.:.|....|:|::| :.| |    |.||.:|
  Fly   332 GGEKDK----------DTCKGDGGSPLVCPI-AGQKNRFKSAGIVAWG-IGC-GEVNIPGVYASV 383

  Fly   271 IHFANWIELHTK 282
            .....||:...|
  Fly   384 AKLRPWIDAKLK 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 42..280 CDD:238113 77/268 (29%)
CG5390NP_609374.1 CLIP_1 64..115 CDD:465709
Tryp_SPc 153..390 CDD:214473 75/265 (28%)
Blue background indicates that the domain is not in the aligned region.

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