DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30287 and Send1

DIOPT Version :10

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster


Alignment Length:275 Identity:81/275 - (29%)
Similarity:119/275 - (43%) Gaps:48/275 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLLIALVFLKVQGQPHLLDPQCVTARSEPGLYRVINGKPADLFSNPWMVIIIERGMMKCGGSLI 72
            |||.:.|:...|  .|.||:|      ||    |:|.|...|:...||.|.:...|...||||:.
  Fly     8 LLLAVHLLISPV--VPVLLEP------SE----RIIGGSSMDITDVPWQVSLQYYGEHFCGGSIY 60

  Fly    73 TPRYVLTAAHCKSETKSQLTVRLGD--YDVNQAVDCSSYGCIPRPREINVTRTYV--PSHYTNFR 133
            :...::|||||..|  .:.::|.|.  :|....|             :.| ..|:  |....:..
  Fly    61 SKTIIITAAHCIKE--GERSIRAGSSLHDSGGVV-------------VGV-EAYIIHPQFDKHNM 109

  Fly   134 KNDIALLRLETTVQYGDNIRSICLLMGDYTWSSNILKNLVKFNTTGWGRTESRINSPVLQQASLT 198
            :||:|:|:|.:.:.:.|:|::|.|...|...||:.|       .|||||....|....||...:.
  Fly   110 ENDVAVLKLSSPLSFSDSIQTIPLAETDPPTSSSAL-------ATGWGRGNFLIRPRQLQGVEIL 167

  Fly   199 HHHLSYCAQVFGKQLDKSHICVASSTGSTCQGDSGGPLTARVRIGSERRVILFGVVS-YGAVHCF 262
            ...|..|...:|..:....||........|.|||||||....:        |.|:.| .|.:.|.
  Fly   168 IRPLIVCKLKYGNGVFNEDICAGRMGKGGCYGDSGGPLVFNGQ--------LVGITSRTGNIVCL 224

  Fly   263 GPTVYTNVIHFANWI 277
            |.::|.:|..:.|||
  Fly   225 GSSLYASVARYRNWI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 42..280 CDD:238113 69/241 (29%)
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 68/240 (28%)

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