DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30287 and Ovch2

DIOPT Version :10

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:XP_003749007.2 Gene:Ovch2 / 308919 RGDID:1564636 Length:579 Species:Rattus norvegicus


Alignment Length:322 Identity:90/322 - (27%)
Similarity:140/322 - (43%) Gaps:75/322 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QLLLLIALVFLKVQGQPHLLD----PQCVTARSEP------GLY-RVINGKPADLFSNPWMVIII 60
            :|:|::.:|.|: ||....|.    |.|..:..:|      .|: |::.|...:..|.||.|.:.
  Rat     7 KLILILGIVCLE-QGHSATLSSIRAPDCGKSLVKPWPQNYFSLFSRIVGGSQVEKGSYPWQVSLK 70

  Fly    61 ERGMMKCGGSLITPRYVLTAAHCKSETKSQLT--VRLGDYDVNQAVDCSSYGCIPRPREINVT-- 121
            ::....|||::|:.::|:|||||.:.....||  |..|::|::||          .|.|..:.  
  Rat    71 QKQKHICGGTIISSQWVITAAHCMANRNIALTLNVTAGEHDLSQA----------EPGEQTLAIE 125

  Fly   122 --------RTYVPSHYTNFRKNDIALLRLETTVQYGDNIRSICLLMGDYTWSSNILKNLVKFNTT 178
                    .|..|.:|      |||||::..|.|:|..:|.:||......:::..:     ..|.
  Rat   126 TIIIHPQFSTKKPMNY------DIALLKMVGTFQFGQFVRPVCLPEPGEQFNAGYI-----CTTA 179

  Fly   179 GWGRTESRINSP-VLQQAS---LTHHHLSYCAQVF----GKQLDKSHICVASSTG--STCQGDSG 233
            ||||.....:.| ||||.:   |||..   |..|.    .....|:.:|..|..|  ..||||||
  Rat   180 GWGRLSEGGSLPQVLQQVNLPILTHEE---CEAVMLTLRNPITGKTFLCTGSPDGGRDACQGDSG 241

  Fly   234 GPLTARVRIGSERRVILFGVVSYGAVHC-------------FGPTVYTNVIHFANWIELHTK 282
            |.|..:.|.|:   ..|.||.|:| :.|             ..|.::|::.....||..|.:
  Rat   242 GSLMCQNRKGA---WTLAGVTSWG-LGCGRSWRNNARKKEQGSPGIFTDLRRVLPWIHEHVQ 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 42..280 CDD:238113 77/272 (28%)
Ovch2XP_003749007.2 Tryp_SPc 52..297 CDD:238113 77/272 (28%)
CUB 317..420 CDD:238001
CUB 431..541 CDD:238001
Blue background indicates that the domain is not in the aligned region.

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