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Protein Alignment CG30287 and Tmprss11e

DIOPT Version :10

Sequence 1:	NP_726083.1	Gene:	CG30287 / 246530	FlyBaseID:	FBgn0050287	Length:	284	Species:	Drosophila melanogaster
Sequence 2:	NP_001406557.1	Gene:	Tmprss11e / 305265	RGDID:	1561698	Length:	423	Species:	Rattus norvegicus

Alignment Length:	308	Identity:	79/308 - (25%)
Similarity:	121/308 - (39%)	Gaps:	74/308 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly    17 LKVQGQPHLLDPQ-------------------CVTARSEPGL---YRVINGKPADLFSNPWMVII 59
            ||....|..:||:                   |.|.|::...   .|::.|..|:....||...:
  Rat   145 LKYATGPPKVDPESVEIKKINKTESDNYLNHCCGTRRNKSTAQTSVRIVGGTSAEEGEWPWQSSL 209

  Fly    60 IERGMMKCGGSLITPRYVLTAAHCKSETK--SQLTVRLGDYDVNQAVDCSSYGCIPRP------- 115
            ...|..:||.:||:..::::||||....|  |:.|              :|:|...:|
  Rat   210 QWDGSHRCGATLISNTWLVSAAHCFRTHKDPSRWT--------------ASFGATLQPPKLTTGI 260

  Fly   116 REINVTRTY-VPSHYTNFRKNDIALLRLETTVQYGDNIRSICLLMGDYTWSSNILKNLVKFNTTG 179
            |.|.|...| .|||     ..||||:.|...|...:.:..:||...::.:...     .:...||
  Rat   261 RRIIVHEKYNYPSH-----DYDIALVELSRPVPCTNAVHKVCLPDANHEFQPG-----QRMFVTG 315

  Fly   180 WG--RTESRINSPVLQQASLTHHHLSYC--AQVFGKQLDKSHICVASSTG--STCQGDSGGPLTA 238
            :|  |.:....: .|:|..:.:.....|  .|.:...:....:|.....|  ..|||||||||
  Rat   316 FGALRNDGFAQN-YLRQVQVDYIDTQTCNRPQSYNGAITPRMLCAGFLKGEKDACQGDSGGPL-- 377

  Fly   239 RVRIGSERRVI--LFGVVSYGAVHCFGPT---VYTNVIHFANWIELHT 281
               :..:.|.:  |.||||:|. .|..|.   |||.|..|.:||..:|
  Rat   378 ---VTPDVRDVWYLAGVVSWGD-ECGQPNKPGVYTRVTAFRDWITSNT 421

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.