DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30287 and F11

DIOPT Version :10

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_001398595.1 Gene:F11 / 290757 RGDID:1309364 Length:622 Species:Rattus norvegicus


Alignment Length:275 Identity:91/275 - (33%)
Similarity:123/275 - (44%) Gaps:58/275 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LDPQCVTARSEPGLYRVINGKPADLFSNPWMVIIIERGMMKCGGSLITPRYVLTAAHCKSETKSQ 90
            :|..| |.:..|   ||..|..:.....||.|.:.......||||:|..|::||||||.|.|::.
  Rat   376 MDNVC-TTKIRP---RVFGGAASVHGEWPWQVTLHTTQGHLCGGSIIGNRWILTAAHCFSGTETP 436

  Fly    91 LTVRLGDYDVNQAVDCSSYGCIPRPREINVTRTY-------VPSHYTNFRKN-DIALLRLETTVQ 147
            .|:|:             ||.|....|||...|:       :...||:.... |||||:||..:.
  Rat   437 KTLRV-------------YGGIVNQSEINEDTTFFRVQEMIIHDQYTSAESGFDIALLKLEPAMN 488

  Fly   148 YGDNIRSICL-LMGDYTWSSNILKNLVKFN--TTGWGRTESR--INSPVLQQASLTHHHLSYCAQ 207
            |.|..|.||| ..||        :|:|...  .||||.|:||  :.| .||:|.:.......|..
  Rat   489 YTDFQRPICLPSKGD--------RNVVHTECWVTGWGYTKSRDEVQS-TLQKAKVPLVSNEECQT 544

  Fly   208 VFGK-QLDKSHICVASSTG--STCQGDSGGPLTARVRIGSERRV-ILFGVVSYGAVHCFG----- 263
            .:.| ::....||.....|  .||:|||||||:.:     ...| .|.|:.|:|.    |     
  Rat   545 RYRKHKITNKVICAGYKEGGKDTCKGDSGGPLSCK-----HNGVWHLVGITSWGE----GCGQKE 600

  Fly   264 -PTVYTNVIHFANWI 277
             |.|||||..:.:||
  Rat   601 RPGVYTNVAKYVDWI 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 42..280 CDD:238113 86/259 (33%)
F11NP_001398595.1 APPLE 20..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519
APPLE 291..374 CDD:128519
Tryp_SPc 388..615 CDD:238113 84/257 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.