DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30287 and CG18420

DIOPT Version :9

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster


Alignment Length:278 Identity:102/278 - (36%)
Similarity:140/278 - (50%) Gaps:24/278 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GAVQLLLLIALVFLKVQGQPHLLDPQCVTARSEPGL-YRVINGKPADLFSNPWMVII-IERGMMK 66
            |...:|||  |....:.|....||.:|.| ||...| .|::|||.|...|:|||..: .......
  Fly     7 GMASILLL--LTVFPLLGSTQFLDSECGT-RSPLKLGPRIVNGKVAVRNSSPWMAFLHTSSNQFI 68

  Fly    67 CGGSLITPRYVLTAAHCKSETKSQLTVRLGDYDVNQAVDCSSYGCIPRPREINVTRTYVPSHY-T 130
            |||:||:.|.||||||| ....:.:.||||:|  |:.:  ..|     ..|..|.||:....| .
  Fly    69 CGGTLISRRLVLTAAHC-FIPNTTIVVRLGEY--NRKL--KGY-----REEHQVNRTFQHRFYDP 123

  Fly   131 NFRKNDIALLRLETTVQYGDNIRSICLLMGDYTWSSNILKNLVKFNT-TGWGRTESRINSPVLQQ 194
            |...||||||||.:.|.|..|||.|| :|.|.:|..:|  :.:|..| ||||||||..:|..|:.
  Fly   124 NTHANDIALLRLVSNVVYKANIRPIC-IMWDASWKHHI--DSIKVLTGTGWGRTESMHDSSELRT 185

  Fly   195 ASLTHHHLSYCAQVFGKQLDKSHICVASSTGSTCQGDSGGPLTARVRIGSERRVILFGVVSYGAV 259
            ..::......||  ||..| .:..|..:...:.|.||:|||:.|.||..:..|.:..|:..... 
  Fly   186 LDISRQPSKMCA--FGSVL-SNQFCAGNWNSNLCIGDTGGPVGAMVRYRNAFRFVQVGIAITNK- 246

  Fly   260 HCFGPTVYTNVIHFANWI 277
            .|..|:|:|:|:....:|
  Fly   247 RCQRPSVFTDVMSHIEFI 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 41..277 CDD:214473 88/238 (37%)
Tryp_SPc 42..280 CDD:238113 88/239 (37%)
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 88/238 (37%)
Tryp_SPc 43..267 CDD:238113 88/239 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I4289
eggNOG 1 0.900 - - E33208_3BQ4K
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000404
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_108863
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.710

Return to query results.
Submit another query.