DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30287 and Tmprss13

DIOPT Version :9

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:XP_006510195.1 Gene:Tmprss13 / 214531 MGIID:2682935 Length:561 Species:Mus musculus


Alignment Length:286 Identity:81/286 - (28%)
Similarity:116/286 - (40%) Gaps:57/286 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 QPHLLDPQCVTAR------SEPGLY----RVINGKPADLFSNPWMVIIIERGMMKCGGSLITPRY 76
            |..|...||.:.|      |..||.    |::.|........||.|.:.......|||:||..::
Mouse   290 QESLYRSQCPSRRYVSLQCSHCGLRAMTGRIVGGALTSESKWPWQVSLHFGTTHICGGTLIDAQW 354

  Fly    77 VLTAAHCKSETKSQL----TVRLGDYDVNQAVDCSSYGCIPRPREINVTRTYVPSHYTNFRKN-D 136
            |||||||...|:.:|    .|..|..:::|.           |...::::..:..:||:.:.: |
Mouse   355 VLTAAHCFFVTREKLLEGWKVYAGTSNLHQL-----------PEAASISQIIINGNYTDEQDDYD 408

  Fly   137 IALLRLETTVQYGDNIRSICLLMGDYTWSSNILKNLVKFNT---TGWGRTE--SRINSPVLQQAS 196
            |||:||...:....:|...||.|...|:..|        .|   ||:|:|:  ....||.|::..
Mouse   409 IALIRLSKPLTLSAHIHPACLPMHGQTFGLN--------ETCWITGFGKTKETDEKTSPFLREVQ 465

  Fly   197 LTHHHLSYCAQ--VFGKQLDKSHICVASSTG--STCQGDSGGPLTARVRIGSERRVILFGVVSYG 257
            :.......|..  |:...|....:|.....|  .:|||||||||...    ...|..|.||.|:|
Mouse   466 VNLIDFKKCNDYLVYDSYLTPRMMCAGDLRGGRDSCQGDSGGPLVCE----QNNRWYLAGVTSWG 526

  Fly   258 AVHCFG------PTVYTNVIHFANWI 277
            .    |      |.|||.|.....||
Mouse   527 T----GCGQKNKPGVYTKVTEVLPWI 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 41..277 CDD:214473 71/255 (28%)
Tryp_SPc 42..280 CDD:238113 72/256 (28%)
Tmprss13XP_006510195.1 PHA03378 <6..>122 CDD:223065
LDLa <204..220 CDD:238060
SRCR_2 225..314 CDD:373897 7/23 (30%)
Tryp_SPc 319..548 CDD:214473 71/255 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.