DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30287 and Tmprss2

DIOPT Version :10

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:XP_008766769.1 Gene:Tmprss2 / 156435 RGDID:620766 Length:580 Species:Rattus norvegicus


Alignment Length:281 Identity:80/281 - (28%)
Similarity:119/281 - (42%) Gaps:69/281 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 QCVT--ARSEPGLYRVINGKPADLFSNPWMVIIIERGMMKCGGSLITPRYVLTAAHCKSE----- 86
            :|:.  .||.....|::.|..|.....||.|.:..:|:..||||:|||.:::|||||..|     
  Rat   239 RCIECGVRSVRRQSRIVGGSTASPGDWPWQVSLHVQGIHVCGGSIITPEWIVTAAHCVEEPLSSP 303

  Fly    87 ---------TKSQLTVRLGDYDVNQAVDCSSYGCIPRPREINVTRTYVPSHYTNFRKNDIALLRL 142
                     .|..|......:.|.:.:.                   .|::.:..:.|||||::|
  Rat   304 RYWTAFAGILKQSLMFYGSRHQVEKVIS-------------------HPNYDSKTKNNDIALMKL 349

  Fly   143 ETTVQYGDNIRSICL----LMGDYT---WSSNILKNLVKFNTTGWGRT-ESRINSPVLQQASLTH 199
            :|.:.:.|.::.:||    :|.|..   |.|            |||.| |....|.||..|.:..
  Rat   350 QTPLAFNDVVKPVCLPNPGMMLDLAQECWIS------------GWGATYEKGKTSDVLNAAMVPL 402

  Fly   200 HHLSYC--AQVFGKQLDKSHICVASSTGS--TCQGDSGGPLTARVRIGSERRVI--LFGVVSYGA 258
            ...|.|  ..::...:..:.||.....||  :|||||||||   |.:.:|   |  |.|..|:|:
  Rat   403 IEPSKCNSKYIYNNLITPAMICAGFLQGSVDSCQGDSGGPL---VTLKNE---IWWLIGDTSWGS 461

  Fly   259 --VHCFGPTVYTNVIHFANWI 277
              ...:.|.||.||..|.:||
  Rat   462 GCAKAYRPGVYGNVTVFTDWI 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 42..280 CDD:238113 76/266 (29%)
Tmprss2XP_008766769.1 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747 1/7 (14%)
Tryp_SPc 254..485 CDD:238113 76/266 (29%)
Blue background indicates that the domain is not in the aligned region.

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