DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30287 and CG43742

DIOPT Version :10

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_001261130.1 Gene:CG43742 / 14462622 FlyBaseID:FBgn0263999 Length:474 Species:Drosophila melanogaster


Alignment Length:280 Identity:100/280 - (35%)
Similarity:137/280 - (48%) Gaps:44/280 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLLIALVFLKVQGQPHLLDPQC---VTARSEPGLYRVINGKPADLFSNPWMVIIIERGMMKCGGS 70
            |||:|:|..: .....|||..|   :|       |||.||..|  .::.:|..:.......||||
  Fly     7 LLLVAVVIYQ-NAFAQLLDENCKVKIT-------YRVANGHTA--ITSQFMAALYNNSEFFCGGS 61

  Fly    71 LITPRYVLTAAHCKSETKSQLTVRLGDYDVNQAVDCSSYGCIPRP-----REINVTRTYVPSHYT 130
            ||..:||||||||..:. .::||.||:         ::..| |.|     ..:|......|:.:.
  Fly    62 LIHKQYVLTAAHCVRDL-DEVTVHLGE---------NNRSC-PIPVCKHVLRLNAKVILHPNFHG 115

  Fly   131 NFRKNDIALLRLETTVQYGDNIRSICLLMGDYTWSSNILKNLVKFNTTGWGRTESRINSPVLQQA 195
            |...|||||||||..|.:..:||.||:::.:...|:|  :|  .|...|||:||....|.||...
  Fly   116 NIFLNDIALLRLEREVIFEAHIRPICIILDEDVTSNN--QN--NFTAYGWGKTEHGNISDVLSFI 176

  Fly   196 SLTHHHLSYCAQVFGKQLDKSHICVASSTGSTCQGDSGGPLTARVRIGSERRVILFGVVSYGAVH 260
            .|.....|.|.|      :.:.||..|::|.||:.||||||........:.|.||||:.|||...
  Fly   177 DLVRLPKSMCYQ------NINTICAGSTSGDTCESDSGGPLIGNFVHRGKSRDILFGITSYGDAE 235

  Fly   261 C---FGPTVYTNVIHFANWI 277
            |   ||  |||:|..:.:||
  Fly   236 CSGLFG--VYTDVNAYKSWI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 42..280 CDD:238113 88/244 (36%)
CG43742NP_001261130.1 Tryp_SPc 34..253 CDD:214473 87/243 (36%)
Tryp_SPc 273..467 CDD:473915
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.