DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30287 and St14

DIOPT Version :10

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_446087.1 Gene:St14 / 114093 RGDID:69288 Length:855 Species:Rattus norvegicus


Alignment Length:263 Identity:78/263 - (29%)
Similarity:121/263 - (46%) Gaps:45/263 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RVINGKPADLFSNPWMVII--IERGMMKCGGSLITPRYVLTAAHC-------KSETKSQLTVRLG 96
            ||:.|..||....||.|.:  :.:|.: ||.|||:|.::::||||       |....:..|..||
  Rat   614 RVVGGTNADEGEWPWQVSLHALGQGHL-CGASLISPDWLVSAAHCFQDETIFKYSDHTMWTAFLG 677

  Fly    97 DYDVNQAVDCSSYGCIPRPREINVTRTYVPSHYTNFRKN-DIALLRLETTVQYGDNIRSICL--- 157
            ..|.::.   |:.|.    :|..:.|......:.:|..: |||||.||...:|...:|.|||   
  Rat   678 LLDQSKR---SASGV----QEHKLKRIITHPSFNDFTFDYDIALLELEKPAEYSTVVRPICLPDN 735

  Fly   158 ----LMGDYTWSSNILKNLVKFNTTGWGRT-ESRINSPVLQQASLTHHHLSYCAQVFGKQLDKSH 217
                ..|...|            .||||.| |....:.:||:..:...:.:.|.::..:|:....
  Rat   736 THVFPAGKAIW------------VTGWGHTKEGGTGALILQKGEIRVINQTTCEELLPQQITPRM 788

  Fly   218 ICVASSTG--STCQGDSGGPLTARVRIGSERRVILFGVVSY--GAVHCFGPTVYTNVIHFANWIE 278
            :||...:|  .:|||||||||::   :..:.|:...||||:  |......|.|||.:....:||:
  Rat   789 MCVGFLSGGVDSCQGDSGGPLSS---VEKDGRIFQAGVVSWGEGCAQRNKPGVYTRIPEVRDWIK 850

  Fly   279 LHT 281
            ..|
  Rat   851 EQT 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 42..280 CDD:238113 76/259 (29%)
St14NP_446087.1 SEA 88..178 CDD:460188
CUB 214..332 CDD:238001
CUB 340..444 CDD:238001
LDLa 454..486 CDD:238060
LDLa 492..523 CDD:238060
LDLa 525..559 CDD:238060
LDLa 567..602 CDD:238060
Tryp_SPc 615..852 CDD:238113 76/259 (29%)
Blue background indicates that the domain is not in the aligned region.

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