DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30287 and ska2

DIOPT Version :9

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:XP_004911727.1 Gene:ska2 / 100496738 XenbaseID:XB-GENE-1001782 Length:163 Species:Xenopus tropicalis


Alignment Length:17 Identity:7/17 - (41%)
Similarity:8/17 - (47%) Gaps:0/17 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VQGQPHLLDPQCVTARS 35
            ||..|..|..|..|.:|
 Frog    77 VQENPVKLLEQLATVKS 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 41..277 CDD:214473
Tryp_SPc 42..280 CDD:238113
ska2XP_004911727.1 SKA2 42..152 CDD:388405 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165162679
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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