DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30287 and LOC100491119

DIOPT Version :10

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:XP_004916446.1 Gene:LOC100491119 / 100491119 XenbaseID:XB-GENE-29080535 Length:512 Species:Xenopus tropicalis


Alignment Length:314 Identity:84/314 - (26%)
Similarity:130/314 - (41%) Gaps:73/314 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AVQLLLLIALVFL-KVQGQPHLLDP----------------QCV-TARSEPGLYRVINGKPADLF 51
            |:..::|.|...: |..|.|:.|:.                ||. ..::...:.|::.|..:.|.
 Frog   220 AMSPIVLEAFAIVNKTDGTPNNLETFMSPVDICPTQEGVSLQCTDCGQASVDIPRIVGGTDSSLG 284

  Fly    52 SNPWMVIIIERGMMKCGGSLITPRYVLTAAHC----KSETKSQLTVRLGDYDVNQAVDCSSYGCI 112
            ..||.|.:...|...||||:|:.::|::||||    ...|.|:..:..|...::..:..|     
 Frog   285 KWPWQVSLRWDGRHMCGGSIISSQWVMSAAHCFVLNGFLTVSRWKIHAGSISLSTGIAYS----- 344

  Fly   113 PRPREINVTRTYVPSHYTNFRKNDIALLRLETTVQYGDNIRSICLLMGDYTWSSNILKNLVKFNT 177
              .|.|.....|  |..||  ..|:|||:....:.:.|..|.:||           .:...:|..
 Frog   345 --VRNIYYNGLY--SLETN--DYDVALLKTTVPMSFSDTTRPVCL-----------PRAYQQFQV 392

  Fly   178 T------GWGR-TESRINSPVLQQA-------SLTHHHLSYCAQVFGKQLDKSHICVASSTG--S 226
            |      |||. :|....|||||:|       .:.:|..:|..|:..:.|     |.....|  .
 Frog   393 TANCWIIGWGHVSEGGQLSPVLQEAKVQLISSQICNHSSNYAGQISPRML-----CAGYPDGRAD 452

  Fly   227 TCQGDSGGPLTARVRIGSERRVILFGVVSYGAVHCFGPT---VYTNVIHFANWI 277
            :|||||||||..: ..|...:|   |:||:|. .|..|.   ||||:....:|:
 Frog   453 SCQGDSGGPLVCQ-EGGLWWQV---GIVSWGE-GCGRPNRPGVYTNLTEVLDWV 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 42..280 CDD:238113 74/259 (29%)
LOC100491119XP_004916446.1 SRCR_2 172..269 CDD:470597 9/48 (19%)
Tryp_SPc 275..501 CDD:238113 73/257 (28%)

Return to query results.
Submit another query.