DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30287 and emx2

DIOPT Version :9

Sequence 1:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_001128284.1 Gene:emx2 / 100038069 XenbaseID:XB-GENE-481028 Length:247 Species:Xenopus tropicalis


Alignment Length:118 Identity:26/118 - (22%)
Similarity:42/118 - (35%) Gaps:49/118 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LYRVINGKPADL---FSNPWMVIIIERGMMKCGGSLITPRYVLTA-----AHCKSETKSQLTV-- 93
            |:..:..||..:   || |..::.:|....|       ..||:.|     ||..|.|::|:.|  
 Frog   141 LHNALARKPKRIRTAFS-PSQLLRLEHAFEK-------NHYVVGAERKQLAHSLSLTETQVKVWF 197

  Fly    94 ----------------------RLGDYDVNQ---AVDCSSYGCIPRPREINVT 121
                                  :.|.:.:|:   |...:|      |.||:||
 Frog   198 QNRRTKFKRQKLEEEGSDSSQKKKGAHHINRWRLATKQAS------PEEIDVT 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30287NP_726083.1 Tryp_SPc 41..277 CDD:214473 25/116 (22%)
Tryp_SPc 42..280 CDD:238113 25/115 (22%)
emx2NP_001128284.1 Homeobox 153..206 CDD:365835 14/60 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.