DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30286 and CG4815

DIOPT Version :10

Sequence 1:NP_726082.3 Gene:CG30286 / 246529 FlyBaseID:FBgn0050286 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_651607.1 Gene:CG4815 / 43360 FlyBaseID:FBgn0039568 Length:265 Species:Drosophila melanogaster


Alignment Length:234 Identity:63/234 - (26%)
Similarity:101/234 - (43%) Gaps:37/234 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LHKSGELVCGGTLVNHRFILTAAHCIREDENLTVRLGEFNSLTSIDCNGSDCLPPSEDFEIDVAF 116
            |....:|||..||:..|.|||||||.   |||  ...:|:   .|....::......:|..:...
  Fly    53 LFNGRKLVCSATLLTPRHILTAAHCF---ENL--NRSKFH---VIGGKSAEFTWHGNNFNKNKLI 109

  Fly   117 R---HGGYSRTNRIHDIGLLRLAKSVEYKVHIKPI--CLITNTTLQPKIERLHRLVATGWGRSP- 175
            |   |..|::...|.|:.:.:    .:|.:..|.|  ..:..:.|.|:    .:|:|.|||... 
  Fly   110 RVQIHPKYAKMKFIADVAVAK----TKYPLRSKYIGYAQLCRSVLHPR----DKLIAAGWGFEGG 166

  Fly   176 --SEAANHILKSIRVTRVNWGVCSKTYWVDRRR--DQICV-SHESGVSCSGDSGGPMGQAIRLDG 235
              .|:.....:|::|..|:...|.|.  :||:.  :.||. ::.:...|.||||||:     |.|
  Fly   167 VWDESRKKTFRSMKVGIVSKRDCEKQ--LDRKMPPNIICAGAYNNKTLCFGDSGGPL-----LLG 224

  Fly   236 R-VLFVQVGIVSYGNAECLSPSVFTNVMEHIDWIMAALS 273
            | |..:.......||.|  .|.|:..|..:..:|...::
  Fly   225 RQVCGINTWTFKCGNNE--KPDVYMGVRYYAKFIKRTIN 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30286NP_726082.3 Tryp_SPc 39..269 CDD:238113 62/228 (27%)
CG4815NP_651607.1 Tryp_SPc 49..259 CDD:473915 63/230 (27%)

Return to query results.
Submit another query.