DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30286 and grass

DIOPT Version :10

Sequence 1:NP_726082.3 Gene:CG30286 / 246529 FlyBaseID:FBgn0050286 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster


Alignment Length:269 Identity:92/269 - (34%)
Similarity:139/269 - (51%) Gaps:23/269 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DCGYMSPEALQNEEHQAHISESPWMAYL--HKSGE--LVCGGTLVNHRFILTAAHCIR--EDENL 83
            |||....:.:.| .::..:|..||||.|  .:.||  .:|||.:::.|:|||||||:.  :::..
  Fly   110 DCGNFLSQRVSN-GYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQNDLY 173

  Fly    84 TVRLGEFNSLTSIDC----NGSDCLPPSEDFEIDVAFRHGGYSRTNRIHDIGLLRLAKSVEYKVH 144
            .:||||....|..||    ....|.||..:..|:....|..|...:.:|||.||:|.:||.::.|
  Fly   174 EIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQKH 238

  Fly   145 IKPICLITNTTLQPKIERLHRLVATGWGRSPSEAANHILKSIRVTRVNWGVCSKTYWVDRRR--- 206
            ||||||.....|:.|.|::.....||||.:.:.:::.:|....|.......||:.|   ||.   
  Fly   239 IKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQANVPLQPRSACSQAY---RRAVPL 300

  Fly   207 DQICV-SHESGVSCSGDSGGPMGQAIRLDGRVL--FVQVGIVSYGNAEC--LS-PSVFTNVMEHI 265
            .|:|| ..:...||.||||||:....:..|...  .|:.||||.|...|  :| |.::|||.|::
  Fly   301 SQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGEYV 365

  Fly   266 DWIMAALST 274
            .||...:::
  Fly   366 QWITDTMAS 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30286NP_726082.3 Tryp_SPc 39..269 CDD:238113 87/248 (35%)
grassNP_651543.1 CLIP 32..90 CDD:197829
Tryp_SPc 121..371 CDD:238113 89/253 (35%)
Blue background indicates that the domain is not in the aligned region.

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