DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30286 and F9

DIOPT Version :10

Sequence 1:NP_726082.3 Gene:CG30286 / 246529 FlyBaseID:FBgn0050286 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_113728.1 Gene:F9 / 24946 RGDID:2589 Length:462 Species:Rattus norvegicus


Alignment Length:238 Identity:68/238 - (28%)
Similarity:107/238 - (44%) Gaps:38/238 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PWMAYLHKSGELVCGGTLVNHRFILTAAHCIREDENLTVRLGEFNSLTSIDCNGSDCLPPSEDFE 111
            ||...|:...|..|||.::|.::|:|||||::..:.:.|..||.|            :...||.|
  Rat   240 PWQVILNGEIEAFCGGAIINEKWIVTAAHCLKPGDKIEVVAGEHN------------IDEKEDTE 292

  Fly   112 ----IDVAFRHGGYSRT-NRI-HDIGLLRLAKSVEYKVHIKPICL----ITNTTLQPKIERLHRL 166
                :.....|..|:.| |:. |||.||.|.|.:....::.|||:    .||..|     :....
  Rat   293 QRRNVIRTIPHHQYNATINKYSHDIALLELDKPLILNSYVTPICVANKEYTNIFL-----KFGSG 352

  Fly   167 VATGWGRSPSEAAN-HILKSIRVTRVNWGVCSKTYWVDRRRDQICVSHESG--VSCSGDSGGPMG 228
            ..:|||:..::... .||:.:||..|:...|.::.......:..|..:..|  .||.||||||  
  Rat   353 YVSGWGKVFNKGRQASILQYLRVPLVDRATCLRSTKFSIYNNMFCAGYREGGKDSCEGDSGGP-- 415

  Fly   229 QAIRLDGRVLFVQVGIVSYGNAECLSP---SVFTNVMEHIDWI 268
            ....::|....  .||:|:|. ||...   .::|.|..:::||
  Rat   416 HVTEVEGTSFL--TGIISWGE-ECAMKGKYGIYTKVSRYVNWI 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30286NP_726082.3 Tryp_SPc 39..269 CDD:238113 68/238 (29%)
F9NP_113728.1 GLA 21..85 CDD:214503
EGF_CA 86..122 CDD:238011
FXa_inhibition 127..163 CDD:464251
Tryp_SPc 228..458 CDD:238113 68/238 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.