DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30286 and Gzmb

DIOPT Version :10

Sequence 1:NP_726082.3 Gene:CG30286 / 246529 FlyBaseID:FBgn0050286 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_612526.2 Gene:Gzmb / 171528 RGDID:620018 Length:248 Species:Rattus norvegicus


Alignment Length:244 Identity:69/244 - (28%)
Similarity:97/244 - (39%) Gaps:41/244 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 HQAHISESPWMAYL----HKSGELVCGGTLVNHRFILTAAHCIREDENLTVRLGEFNSLTSIDCN 99
            |:|.....|:||||    ..||...|||.|:...|:||||||  ....:.|.||..|        
  Rat    25 HEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHC--SGSKINVTLGAHN-------- 79

  Fly   100 GSDCLPPSEDFE--IDVA--FRHGGYSRTNRIHDIGLLRLAKSVEYKVHIKPICLITNTTLQPKI 160
                :...|..:  |.|.  ..|..|:.....:||.||:|....:....:||:.|.....   |:
  Rat    80 ----IKEQEKMQQIIPVVKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPLNLPRRNV---KV 137

  Fly   161 ERLHRLVATGWGR-SPSEAANHILKSIRVTRVNWGVCS---KTYWVDRRRDQICVSHE--SGVSC 219
            :........|||: .|....:..|:.:.:|......|.   |.|:  .:.::||....  ...|.
  Rat   138 KPGDVCYVAGWGKLGPMGKYSDTLQEVELTVQEDQKCESYLKNYF--DKANEICAGDPKIKRASF 200

  Fly   220 SGDSGGPMGQAIRLDGRVLFVQVGIVSYGNAECLSPSVFTNVMEHIDWI 268
            .||||||:        ....|..||||||..:..:|..||.|...:.||
  Rat   201 RGDSGGPL--------VCKKVAAGIVSYGQNDGSTPRAFTKVSTFLSWI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30286NP_726082.3 Tryp_SPc 39..269 CDD:238113 69/244 (28%)
GzmbNP_612526.2 Tryp_SPc 21..244 CDD:238113 69/244 (28%)

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