DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30286 and Gzmbl3

DIOPT Version :10

Sequence 1:NP_726082.3 Gene:CG30286 / 246529 FlyBaseID:FBgn0050286 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_001316809.2 Gene:Gzmbl3 / 120766154 RGDID:2320502 Length:214 Species:Rattus norvegicus


Alignment Length:229 Identity:62/229 - (27%)
Similarity:91/229 - (39%) Gaps:31/229 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 MAYL----HKSGELVCGGTLVNHRFILTAAHCIREDENLTVRLGEFNSLTSIDCNGSDCLPPSED 109
            ||||    ..|.:.:|||.|:...|:||||||  ....:.|.||..|.        .:.....:.
  Rat     1 MAYLQYKNEDSRDTICGGFLIREDFVLTAAHC--SGSKINVTLGAHNI--------KEREKTQQV 55

  Fly   110 FEIDVAFRHGGYSRTNRIHDIGLLRLAKSVEYKVHIKPICLITNTTLQPKIERLHRLVATGWGR- 173
            ..:.....|..|:.....:||.||:|....:....:||:.|..:..   |::........|||: 
  Rat    56 IPVVKIIPHPAYNAKTISNDIMLLKLKSKAKRTSTVKPLNLPRSNF---KVKPGDVCYVAGWGKL 117

  Fly   174 SPSEAANHILKSIRVTRVNWGVCSKTYWVDR--RRDQICVSHE--SGVSCSGDSGGPMGQAIRLD 234
            .|.......|:.:.:|......| :||..:.  :.:|||....  ...|..|.||||:       
  Rat   118 GPMGKFPDTLQEVELTVQEDQEC-ETYLKNAYDKANQICAGDPKIKRASFQGASGGPL------- 174

  Fly   235 GRVLFVQVGIVSYGNAECLSPSVFTNVMEHIDWI 268
             ....|..||||||..:..:|..||.|...:.||
  Rat   175 -VCKKVAAGIVSYGRKDGSTPRAFTKVSTFLSWI 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30286NP_726082.3 Tryp_SPc 39..269 CDD:238113 62/229 (27%)
Gzmbl3NP_001316809.2 None

Return to query results.
Submit another query.