DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30284 and LAM4

DIOPT Version :10

Sequence 1:NP_726097.1 Gene:CG30284 / 246527 FlyBaseID:FBgn0050284 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_011948.1 Gene:LAM4 / 856480 SGDID:S000001122 Length:1345 Species:Saccharomyces cerevisiae


Alignment Length:358 Identity:63/358 - (17%)
Similarity:126/358 - (35%) Gaps:107/358 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QARLNHRFRKTLAMDKPSSSNSNRMSRSTSNCRSPAIIRSPLNSEEFQDSATAAATQQRLFWSGQ 69
            |..|..|||.       :|:|:|..|.|.|:.          .::::.|.               
Yeast   656 QIILGKRFRS-------NSNNTNSSSNSISDD----------ENDDYDDD--------------- 688

  Fly    70 RASTAGRDDKTKPDSTAAGKKKPPTTTRQSNFTQTERRRTHRKLSPRSTRCNSVAVTALVSRENI 134
             ....|.||....|::                         ..:|..:...:||::.   ..|::
Yeast   689 -YDDYGDDDDDLYDNS-------------------------NNISDSTDMTSSVSIG---KPEDL 724

  Fly   135 P---QTSGKRGKKTPSHRSTLISTPSKTLQLKTAAGYRRPEDLTARCSASHEGRKLLQERLMVRV 196
            |   ||....|...|. ....|.:|::|: .|.|...:...:.|...|.   ||           
Yeast   725 PMPLQTDTPYGTGIPP-LGPKIHSPTETV-YKPAPNEKLVNESTIHASL---GR----------- 773

  Fly   197 DALFNMLFSAS-PFLQSFHERRKSTDLN---MGVWARNAGGQNQRTVSMTVALQANVGPKTAKIT 257
              :.|:||... .::.:..:.:|::|::   :.|.:.......:|..|........:||...|..
Yeast   774 --VVNILFGKDVSYIMAILKAQKNSDISPIPVLVDSPTVSEGKKRDYSYVKTTPGAIGPGKTKCM 836

  Fly   258 ETQTMRECSQPGQLYSID--VQSVNA----DIPYADTFVVLMHFCLKATVEEHTDVLVFAEIQFL 316
            .|:|:       |.::::  ||.:..    |:|..::|.|...:.|.......|.:.::..::  
Yeast   837 ITETI-------QHFNLEEYVQVLQTTKTPDVPSGNSFYVRTVYLLSWANNNETKLKLYVSVE-- 892

  Fly   317 KSVW---AVVKTFIERNAYAGLEEFCQSLYSAL 346
               |   :::|:.||:..:.|:.:..:.|...|
Yeast   893 ---WTGKSLIKSPIEKGTFDGVTDATKILVEEL 922

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30284NP_726097.1 VASt 186..334 CDD:464975 26/160 (16%)
LAM4NP_011948.1 PH-GRAM_GRAMDC 561..654 CDD:275406
VASt 761..910 CDD:464975 30/176 (17%)
VASt 974..1119 CDD:464975
Blue background indicates that the domain is not in the aligned region.

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